Gene Information

Name : SCAB_59541 (SCAB_59541)
Accession : YP_003491511.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6624957 - 6625688 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGAGCACACCCCCCACGAGAACCCCGACCCCGGCCCCGGTCCGCTGCTGGCGGCCCGCGGGCTGGTCAAGCGCCA
CGGCAGGACCGAGGCGCTGCGCGGTGCCTCCGTGGAACTGCGCGAGGGAGAGATCCTCGCCGTCACCGGGGCCAGCGGCA
GCGGCAAGTCCACGCTGCTGCACTGCCTCGCGGGCATCGTCCGCCCGGACGAGGGTTCGGTGGCCTACGCCGGAAAGCGG
CTCGACCGGCTCAAGGAGAAGGAGCTGAGCGAACTGCGCCGGACGGACTTCGGGGTCGTCTTCCAGTTCGGGCAGCTGAT
ACCCGAGCTGACGGCCGTCGACAACGTCGCGCTGCCGCTCATGCTGGCCGGCACGACCCGCCAGGAGGCGCGGGAACGGG
CCGGTGAGTGGCTGGAGCGGTTCGGGGTGCGCGGGCAGCAGGAGCAGCGGCCCGGTGAGATGAGCGGCGGTCAGACACAG
CGGGTGTCGCTCGCGCGGGCCCTGGTGACCGCGCCGAAGGTGGTCTTCGCGGACGAGCCGACCGGGGCGCTGGACTCCCT
GGCGGGCGAGCAGGTGATGGCCGCGCTGACGCACGCGGCCCGGGAGTCCGGTACGGCGGTCCTGCTGATCACCCATGACG
CCCAGACGGCGGCGTACGCGGACCGGGAGGTCGCGTTGCGGGACGGGGTCGTGCCGGCGGAGGCGGACGTGACGCTGGAG
GTGTCCCGGTGA

Protein sequence : 
MNEHTPHENPDPGPGPLLAARGLVKRHGRTEALRGASVELREGEILAVTGASGSGKSTLLHCLAGIVRPDEGSVAYAGKR
LDRLKEKELSELRRTDFGVVFQFGQLIPELTAVDNVALPLMLAGTTRQEARERAGEWLERFGVRGQQEQRPGEMSGGQTQ
RVSLARALVTAPKVVFADEPTGALDSLAGEQVMAALTHAARESGTAVLLITHDAQTAAYADREVALRDGVVPAEADVTLE
VSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_59541 YP_003491511.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-29 43
SCAB_59541 YP_003491511.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-36 41