Gene Information

Name : SCAB_54511 (SCAB_54511)
Accession : YP_003491024.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6059629 - 6060399 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence :
GTGACCACCACTCCCCTCGCCGACCGGGCCACCGTCGTGGCCGCCCGCGCCACGGAACTGTCGAAGGTCTACGGACAGGG
CGAGACCCGGGTGGTCGCGCTGGACCAGGTCTCCATCGACTTCCGGCAGGCCCAGTTCACCGCGATCATGGGCCCCTCGG
GCTCCGGCAAGTCCACGCTGATGCACTGCGTGGCGGGCCTGGACACCTTCTCCTCCGGCTCCGTCCGCATCGGCGACACC
GAGCTGGGCTCGCTCAAGGACAAGCAGCTCACCAAGTTGCGCCGGGACAAGATCGGGTTCATCTTCCAGGCGTTCAACCT
GCTGCCCACCCTGACCGCGCTGGAGAACATCACCCTCCCGATGGACATCGCGGGCCGCAAGCCGGACAAGCAGTGGCTGG
ACACCGTGATCCGCATGGTGGGCCTCGCCGACCGGCTCAAGCACCGGCCCGCCCAGCTCTCCGGCGGCCAGCAGCAGCGC
GTGGCGGTGGCCCGCGCCCTCGCCTCCCGCCCGGACATCATCTTCGGCGACGAGCCGACCGGAAACCTCGACTCGCGTTC
GGGCGCCGAGGTGCTGGGCTTCCTCCGCAACTCCGTACGGGAGTTGGGGCAGACCGTGGTGATGGTGACCCACGACCCGG
TGGCCGCGGCCTACGCGGACCGGGTCGTCTTCCTCGCCGACGGACGCCTCGTGGACGAGATCCACGAGCCGACGGCCGAC
TCCGTCCTCGACCGCATGAAGCGGTTCGACAGCAAGGGCCGTACGAGCTAG

Protein sequence :
MTTTPLADRATVVAARATELSKVYGQGETRVVALDQVSIDFRQAQFTAIMGPSGSGKSTLMHCVAGLDTFSSGSVRIGDT
ELGSLKDKQLTKLRRDKIGFIFQAFNLLPTLTALENITLPMDIAGRKPDKQWLDTVIRMVGLADRLKHRPAQLSGGQQQR
VAVARALASRPDIIFGDEPTGNLDSRSGAEVLGFLRNSVRELGQTVVMVTHDPVAAAYADRVVFLADGRLVDEIHEPTAD
SVLDRMKRFDSKGRTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_54511 YP_003491024.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-42 47
SCAB_54511 YP_003491024.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-36 47
SCAB_54511 YP_003491024.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-35 45