Gene Information

Name : SCAB_4851 (SCAB_4851)
Accession : YP_003486257.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 547313 - 548023 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCCGGGTGGTGACCGCAGCCATGCTGCGGGTGACGGATGTTCACAAGTCGTACGGGCGAGGCGCGGGGACCGTGCA
CGCGCTGCGTGGCGTCTCCTTCGAGGTTCCCCGGGGGGAACTCGTCGCCGTGAAGGGACGTTCGGGCTCGGGCAAGACCA
CCCTGCTCAACATCGTCGGTGGTCTGGACGAGCCGGACAGCGGACATGTGACCGTCGACGGGCTGGACCTGCGGGAGCAG
AGCGAGGACGCCCTGCTCGCGCTGCGCCGGGAGCGCATCGGCTTCGTCTTCCAGTCGTTCGGCCTCCTGCCCATCCTCAC
GGCCGCCGAGAACGTGGGCGTACCGCTGCGGCTGCGGAGGGCGGACCCGCACGAACGGCGGGAGCGTGTCGACCTGTTGC
TGTCCCTCGTGGGGCTCGCGGACCATGCGGAGCAGCGCCCGGGCGAGTTGTCCGGCGGACAGCGCCAGCGCGTCGCGATC
GCCCGAGCCCTGGCCAACAGCCCCTCGATCCTCATCGCCGACGAGCCGACCGGTCAACTGGACGCGGAGACCGGGCACTC
CGTGATGGAACTGCTGCGCGCGGTCGTCCGCAGCGAACAGATCACGGCTCTGGTGGCCACGCACGACGCGACCCTCCTGG
ACCTCGCGGATCGTGTGCTGGAACTGAACGACGGCGAGATCACCGAGGTCGCCAGGAGCGAGGCCCGGTGA

Protein sequence : 
MSRVVTAAMLRVTDVHKSYGRGAGTVHALRGVSFEVPRGELVAVKGRSGSGKTTLLNIVGGLDEPDSGHVTVDGLDLREQ
SEDALLALRRERIGFVFQSFGLLPILTAAENVGVPLRLRRADPHERRERVDLLLSLVGLADHAEQRPGELSGGQRQRVAI
ARALANSPSILIADEPTGQLDAETGHSVMELLRAVVRSEQITALVATHDATLLDLADRVLELNDGEITEVARSEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_4851 YP_003486257.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-37 51
SCAB_4851 YP_003486257.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-45 43
SCAB_4851 YP_003486257.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-41 42
SCAB_4851 YP_003486257.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-37 41
SCAB_4851 YP_003486257.1 ABC transporter ATP-binding protein BAC0600 Protein 2e-21 41