|
Name : dnaB (SCAB_46161) Accession : YP_003490217.1 Strain : Streptomyces scabiei 87.22 Genome accession: NC_013929 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 5175496 - 5176956 bp Length : 1461 bp Strand : + Note : - DNA sequence : TTGGACGACCCGTGGGCCGACAGCGGACCCGGTGATCGTCTGCCGCCTTCCCGACGACGTCCGGACGACGGGGGCCGCGG CAGGGAGGAGCGGCACGACCGCGGCAGGGACAACGGGGAATGGGACGGCGGGGGTTCGGCCTTCGAGCGTGTCCCCCCGC AGGACCTCGACGCCGAACAGTCCGTCCTCGGCGGCATGCTGCTGTCCAAGGACGCCATCGCCGACGTGGTCGAGATCCTC AAGGGCCCCGACTTCTACAAGCCGGCTCACGAGACCATCTACCAGGCGATTCTCGACATCTACGCCAAGGGTGAGCCGGC CGACCCCATCACCATCGCCGCCGAGCTGACCAAACGCGGCGAGATCACCAAGGTCGGCGGCGCCTCCTATCTGCACACCC TCGTCCAGACGGTGCCGACGGCGGCGAACGCCGAGTACTACGCGGAGATCGTCCACGAGCGGGCCGTCCTGCGACGTCTG GTCGAGGCCGGCACCCGCATCACCCAGATGGGATACGCGGCCGACGACGACGTCGACGAGATCGTCAACAGGGCGCAGGC CGAGATCTTCGCGGTCACCGAGCAGCGCACCACCGAGGACTACCTGCCGCTCGGCGACATCATGGAGGGGGCTCTCGACG AGATCGAGGCGATCGGTTCGCGGTCGGGCGAGATGACCGGCGTGCCGACGGGTTTCACCGACCTCGACCAGCTCACGAAC GGTCTGCATCCCGGCCAGATGATCATCATCGCGGCCCGTCCCGCCATGGGTAAGTCGACCCTGGCGCTGGACTTCGCGCG CGCCTGTTCGATCAAGCACAACATGCCGAGCGTGATCTTCTCGCTCGAGATGGGGCGCAACGAGATCGCGATGCGTCTGC TGTCGGCCGAGGCACGTGTCGCCCTGCACCACATGCGCTCCGGCACGATGACGGACGAGGACTGGACGCGCCTGGCCCGC CGCATGCCCGACGTCTCGGCCGCACCGCTCTACATCGACGACTCCCCGAACCTGTCGATGATGGAGATCCGCGCCAAGTG CCGGCGCCTGAAGCAGCGCAACGACCTGAAGCTCGTCATCATCGACTATCTGCAGCTCATGCAGTCCGGTGGAAAACGGT CCGAGAGCCGCCAGCAGGAGGTCTCCGACATGTCGCGAAACCTGAAGCTGCTGGCCAAGGAGCTGGAGCTGCCGGTGATC GCGCTGTCGCAGCTCAACCGTGGACCTGAGCAGCGTACGGACAAGAAGCCCATGGTGTCCGACCTGCGTGAGTCGGGATC GATCGAGCAGGACGCGGACATGGTGATCCTGCTGCACCGCGAGGACGCCTACGAGAAGGAATCGCCGCGCGCGGGCGAGG CCGACATCATCGTGGGCAAGCACCGTAACGGCCCGACGGCGACGATCACGGTCGCCTTCCAGGGCCACTACTCGCGATTC GTGGACATGGCACAGACCTGA Protein sequence : MDDPWADSGPGDRLPPSRRRPDDGGRGREERHDRGRDNGEWDGGGSAFERVPPQDLDAEQSVLGGMLLSKDAIADVVEIL KGPDFYKPAHETIYQAILDIYAKGEPADPITIAAELTKRGEITKVGGASYLHTLVQTVPTAANAEYYAEIVHERAVLRRL VEAGTRITQMGYAADDDVDEIVNRAQAEIFAVTEQRTTEDYLPLGDIMEGALDEIEAIGSRSGEMTGVPTGFTDLDQLTN GLHPGQMIIIAARPAMGKSTLALDFARACSIKHNMPSVIFSLEMGRNEIAMRLLSAEARVALHHMRSGTMTDEDWTRLAR RMPDVSAAPLYIDDSPNLSMMEIRAKCRRLKQRNDLKLVIIDYLQLMQSGGKRSESRQQEVSDMSRNLKLLAKELELPVI ALSQLNRGPEQRTDKKPMVSDLRESGSIEQDADMVILLHREDAYEKESPRAGEADIIVGKHRNGPTATITVAFQGHYSRF VDMAQT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-71 | 42 |
