Gene Information

Name : SCAB_42561 (SCAB_42561)
Accession : YP_003489873.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Unknown
Product : iron-sulfur-binding reductase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 4795737 - 4798034 bp
Length : 2298 bp
Strand : +
Note : -

DNA sequence :
ATGCAACTCGCCGCGATCATCGTGTCGCTGGTTTTGACCGTGGTCGGCGTTGCGCTCATCGCCCGAGCCGTGGCGCAGAT
CTACCGCTTCGTGAAGCTCGGTCAGCCGGTGCCTGCGGGCAGCCGCACGGACGACCCGAAGGCGCGCACGATCACCCTGG
TCAAGGAGTTCCTCGGCCACACCCGGATGAACCGGTGGGGGATCGTCGGCTTCGCCCACTGGTTCGTCGCGATCGGCTTC
CTGACGCTGCCGCCCACCCTCGCCCAGGCGTACGGCCAGCTGTTCCAGGCCGACTGGACGCTGCCGGTGATCGGCGGCTT
CCTGCCGTTCGAGATGTACATCGAGTTCATCGGTGTGATGACGATCCTCGGCATCCTGGTGCTGATCGCCGTCCGGCTGC
TCAACCTGCCCTCCCGGGCCGGCCGCAAGTCGCGTTTCGCGGGCTCCAAGGCCTGGCAGGCGTACTTCGTCGAGTACGTC
ATCCTCACCATCGGCCTCGCGATCTACACCCTGCGCGGTCTCGAGGGCGCCATCCACCACGTGGACCACTACGAGGCCGG
CTACTTCGCCTCGTACCCGCTGGTCACGGCCTTCCGGGACCTGGACCCGAGCACCCTGCAGAACCTGGTGTACTTCACCG
CGATGATCAAGATCGGTGTCTCGCTGATCTGGATGATCACGGTGTCGCTCAACACCAACATGGGTGTCGCCTGGCACCGC
TTCCTCGGCTTCCCGAACATCTGGTTCAAGCGCAACGCCGACGGCGCGACGGCGCTCGGCGGCCTCCAGCCCATGACCTC
GGGCGGCAAGCCGATCGACTTCACCGACCCCGGTGACGACGACGTCTTCGGTGTCAGCCAGGTGGAGCAGTTCTCCTGGA
AGGGCATCCTCGACTTCTCGACCTGCACCGAGTGCGGCCGCTGCCAGTCGCAGTGCCCGGCCTGGAACACCGGCAAGCCG
CTGTCCCCGAAGCTGCTGATCATGTCGCTGCGGGACCACGCGCACGCCAAGGCCCCCTACCTGCTCGCCGGTGGCGGCAA
GAGCATGGAGGGCGAGGAGAAGGCGTCCGAGGAGCAGTTGAAGGACGTGCCCGCCGCGGCCCTGGCCGAGGCCGAGCGCC
CGCTGATCGGGACCGTCGAGGAGAACGGCGTCATCGACCCGGACGTCCTGTGGTCCTGCACCACCTGCGGCGCCTGCGTC
GAGCAGTGCCCGGTCGACATCGAGCACGTCGACCACATCGTCGACATGCGCCGCTACCAGGTGATGATCGAGTCCGCGTT
CCCGTCCGAGGCGGGCACGATGCTCAAGAACCTGGAGAAGAAGGGCAACCCCTGGGGCCTGGCGAAGAAGCAGCGCCTGG
AGTGGCTCAAGGAGGTCGAGTTCGAGGTCCCGGTCGTCGGCAAGGACATCGAGGACCTGTCCGAGGTCGAGTACCTGTAC
TGGGTCGGCTGCGCCGGCGCCCTCGAGGACCGCGCCAAGAAGACCACCAAGGCCTTCGCCGAACTGCTCCACATGGCGGG
CGTGAAGTTCGCCATCATGGGCGGCGACGAGAAGTGCACCGGTGACTCCGCCCGCCGCCTCGGCAACGAGCCCCTCTTCC
AGGAGCTCGGCATGGAGAACGTGGCCGCGCTGAACATGGCCTTCGGCGAGGAGACGGACGACGAGGGCAAGGTCGTGCCC
GAGTCCGCGAAGCCGAAGTCGGCGAAGAAGATCGTCGCCACCTGCCCGCACTGCCTCAACACGCTCGGCAACGAGTACCC
GCAGCTCGGCGGCGACTACGAGGTCATCCACCACACCCAGCTGCTCCAGCACCTCATCGACGAGGGCAAGCTGATCCCGG
TGACCCCGGTCGAGGGCCTGATCACCTACCACGACCCGTGCTACCTGGGCCGTCACAACAAGATCTACACGCCCCCGCGC
GAGATCATGTCGGCCGTCCCGGGCCTGCGCCAGCAGGAGATGCACCGCCACAAGGAGCGCGGCTTCTGCTGCGGTGCCGG
TGGCGCGCGGATGTGGATGGAGGAGCGGATCGGCAAGCGCATCAACAACGAGCGCGTCGACGAGGCCCTGTCCCTGAACC
CGGACATCGTCTCCACCGCCTGCCCGTTCTGCCTCGTCATGCTGACCGACTCGGTCAACGGCAAGAAGAACGACGGCAAG
GCCAAGGAGTCCATCACGGTCGTCGACGTCGCCCAGCTGCTGCTGGAGTCCGTCAAGACACCCGTCCCGGACGAGGACGA
GCCCCCGGCGGGCTCGACGGACGCGGAGAGCGAGCCGGAGCCGCAGCCGGTCGAGTAG

Protein sequence :
MQLAAIIVSLVLTVVGVALIARAVAQIYRFVKLGQPVPAGSRTDDPKARTITLVKEFLGHTRMNRWGIVGFAHWFVAIGF
LTLPPTLAQAYGQLFQADWTLPVIGGFLPFEMYIEFIGVMTILGILVLIAVRLLNLPSRAGRKSRFAGSKAWQAYFVEYV
ILTIGLAIYTLRGLEGAIHHVDHYEAGYFASYPLVTAFRDLDPSTLQNLVYFTAMIKIGVSLIWMITVSLNTNMGVAWHR
FLGFPNIWFKRNADGATALGGLQPMTSGGKPIDFTDPGDDDVFGVSQVEQFSWKGILDFSTCTECGRCQSQCPAWNTGKP
LSPKLLIMSLRDHAHAKAPYLLAGGGKSMEGEEKASEEQLKDVPAAALAEAERPLIGTVEENGVIDPDVLWSCTTCGACV
EQCPVDIEHVDHIVDMRRYQVMIESAFPSEAGTMLKNLEKKGNPWGLAKKQRLEWLKEVEFEVPVVGKDIEDLSEVEYLY
WVGCAGALEDRAKKTTKAFAELLHMAGVKFAIMGGDEKCTGDSARRLGNEPLFQELGMENVAALNMAFGEETDDEGKVVP
ESAKPKSAKKIVATCPHCLNTLGNEYPQLGGDYEVIHHTQLLQHLIDEGKLIPVTPVEGLITYHDPCYLGRHNKIYTPPR
EIMSAVPGLRQQEMHRHKERGFCCGAGGARMWMEERIGKRINNERVDEALSLNPDIVSTACPFCLVMLTDSVNGKKNDGK
AKESITVVDVAQLLLESVKTPVPDEDEPPAGSTDAESEPEPQPVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fadF YP_005682164.1 Protein fadF Not tested PiCp 7 Protein 6e-143 45
fadF YP_005684256.1 Protein fadF Not tested PiCp 7 Protein 6e-143 45
fadF YP_005686348.1 Protein fadF Not tested PiCp 7 Protein 6e-143 45
cpfrc_01915 YP_003784315.1 hypothetical protein Not tested PiCp 7 Protein 6e-143 45