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Name : clpB (SCAB_42291) Accession : YP_003489847.1 Strain : Streptomyces scabiei 87.22 Genome accession: NC_013929 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4764793 - 4767408 bp Length : 2616 bp Strand : - Note : - DNA sequence : GTGGACGCCGAGCTGACCAACAGGAGCCGGGACGCGATCAACGCGGCCAGCAACCGGGCCGTGTCCGAGGGACACGCCGA CTTCACCCCCGCCCACCTGCTGCTGGCTCTGCTCCAGGGCCAGGAGAACGAGAACATCACCGACCTGCTCGCCGCCGTCG ACGCCGACCAGGCGGCCGTGCGCGCGGGCGCGGAGAAGATCCTGGCCGGTCTGCCCAGCGTGACCGGCGCCACCGTGTCG CCGCCCCAGCCCAACCGCGAGCTGCTCAGCGTGGTCGCCGAGGCCCAGGCCAAGGCGAAGGAGCTGGGCGACGAGTACGT CTCCACCGAGCACCTCCTGATCGGGATCGCGGAGAAGGGCGGCCAGGCCGGGGACGTACTCTCCCGGCAGGGGGCGAACG CCGGGAAGCTGCAGGAGGCGTTCCAGAAGGCAAGGGGAGGACGCAGGGTGACCACCGCCGATCCGGAGGGCCAGTACAAG GCCCTGGAGAAGTTCGGGACCGATTTCACCGCCGCCGCGCGGGACGGGAAGCTCGACCCCGTCATCGGCCGGGACCAGGA GATCCGGCGTGTCGTGCAGGTGCTCTCCCGCCGGACCAAGAACAACCCCGTCCTCATCGGTGAGCCCGGCGTCGGCAAGA CCGCCGTCGTCGAGGGGCTCGCCCAGCGGATCGTCAAGGGGGACGTGCCCGAGTCGCTGAAGAACAAGCGGCTGGTCTCG CTCGACCTCGGCGCCATGGTCGCCGGGGCCAAGTACCGGGGCGAGTTCGAGGAGCGGCTGAAGACGGTCCTCGCCGAGAT CAAGGACTCCGACGGCCAGATCATCACCTTCATCGACGAGCTGCACACCGTCGTCGGCGCGGGCGCCGGCGGCGACTCCG CCATGGACGCCGGCAACATGCTGAAGCCGATGCTGGCCCGCGGCGAGCTGCGCATGGTCGGCGCGACGACCCTCGACGAG TACCGCGAGCGCATCGAGAAGGACCCGGCGCTGGAGCGCCGCTTCCAGCAGGTGCTGGTCGCCGAGCCGACCGTCGAGGA CACCATCGCGATCCTGCGCGGTCTCAAGGGCCGCTACGAGGCCCACCACAAGGTCGTGATCGCGGACGCGGCCCTGGTCG CCGCCGCCACCCTCTCCGACCGGTACATCACCTCCCGCTTCCTGCCCGACAAGGCCATCGACCTCGTCGACGAGTCCGCC TCCCGGCTCCGGATGGAGATCGACTCCTCGCCCGTCGAGATCGACGAGCTGCAGCGGTCCGTGGACCGGCTCCGCATGGA GGAGATGGCCCTCGACAAGGAGACCGACGCCGCCTCCCGCGAGCGCCTGGAGCGGCTGCGCCGCGACCTAGCCAACAAGG AGGAGGACCTGCGGGGCCTCACCGCCCGCTGGGAGAAGGAGAAGCAGTCCCTCAACGCGGTCGGTGAACTCAAGGAGAAG CTCGACGAGTTGCGCGGGCAGGCCGAACGCGCCCAGCGCGACGGCGACTTCGACACCGCCTCCAAGCTGCTCTACGGCGA GATCCCCACCCTGGAGCGGGCGTTGGAAGAGGCGTCCGAGGCCGAGGAGGAGGCCGCCGCGTCCAAGAACACCATGGTCA AGGACGAGGTCGGCGCCGACGACATCGCCGACGTCGTCGCCTCCTGGACCGGCATCCCGGCCGGCCGCCTGCTGGAGGGC GAGACGCAGAAGCTGCTGCGCATGGAGGAGGAGCTGGGCCGCCGCCTGATCGGCCAGACCGAGGCCGTACGGGCCGTCTC CGACGCCGTACGCCGCTCCCGCGCGGGCATCGCCGACCCGGACCGCCCCACCGGCTCCTTCCTCTTCCTCGGCCCGACGG GCGTCGGCAAGACGGAGCTGGCGAAGGCGCTGGCCGACTTCCTCTTCGACGACGAGCGGGCCATGATCCGCATCGACATG TCGGAGTACAGCGAGAAGCACAGCGTCGCCCGGCTCGTCGGCGCGCCCCCCGGGTACATCGGCTACGAGGAGGGCGGCCA GCTCACCGAGGCCGTCCGCCGCCGCCCGTACTCCGTCGTGCTGCTGGACGAGGTGGAGAAGGCGCACCCCGAGGTCTTCG ACATCCTCCTCCAGGTGCTGGACGACGGCCGGCTCACCGACGGACAGGGCCGTACGGTCGATTTCCGCAACACGATCCTG ATCCTCACCTCGAACCTGGGCAGCCAGTACCTGGTCGACCCGGTCACCACCGAGGCGGAGAAGAAACAGCAGGTCATGGA CGTGGTGCGGGCCTCCTTCAAGCCGGAGTTCCTCAACCGCCTCGACGACCTCGTAGTCTTCTCCGCCCTGGACAAGGCGG AGCTGGAGCGCATCGCCAAGCTGCAGATCGAGCGCCTGTCCAAGCGTCTCGCCGAACGCCGTCTCACCCTGGAGATCACC CCCGAGGCCCTGGCCTGGCTCGCGGACGAGGGCAACGATCCGGCCTACGGCGCCCGCCCCCTGCGCCGCCTCGTCCAGAC CGCCATCGGCGACCGCCTGGCCAAGGAGATCCTGTCCGGCGAGGTCAAGGACGGCGACACGGTCCGGGTGGACGCGTTCG GCGAGGGTGAGGGGCTGATCGTGGGCCCGGTCCCGTCGCTGGAGAAGAAGCCGTGA Protein sequence : MDAELTNRSRDAINAASNRAVSEGHADFTPAHLLLALLQGQENENITDLLAAVDADQAAVRAGAEKILAGLPSVTGATVS PPQPNRELLSVVAEAQAKAKELGDEYVSTEHLLIGIAEKGGQAGDVLSRQGANAGKLQEAFQKARGGRRVTTADPEGQYK ALEKFGTDFTAAARDGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKNKRLVS LDLGAMVAGAKYRGEFEERLKTVLAEIKDSDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE YRERIEKDPALERRFQQVLVAEPTVEDTIAILRGLKGRYEAHHKVVIADAALVAAATLSDRYITSRFLPDKAIDLVDESA SRLRMEIDSSPVEIDELQRSVDRLRMEEMALDKETDAASRERLERLRRDLANKEEDLRGLTARWEKEKQSLNAVGELKEK LDELRGQAERAQRDGDFDTASKLLYGEIPTLERALEEASEAEEEAAASKNTMVKDEVGADDIADVVASWTGIPAGRLLEG ETQKLLRMEEELGRRLIGQTEAVRAVSDAVRRSRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDM SEYSEKHSVARLVGAPPGYIGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTIL ILTSNLGSQYLVDPVTTEAEKKQQVMDVVRASFKPEFLNRLDDLVVFSALDKAELERIAKLQIERLSKRLAERRLTLEIT PEALAWLADEGNDPAYGARPLRRLVQTAIGDRLAKEILSGEVKDGDTVRVDAFGEGEGLIVGPVPSLEKKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-92 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-90 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-90 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003489847.1 | chaperone ClpB | VFG2076 | Protein | 9e-106 | 42 |
| clpB | YP_003489847.1 | chaperone ClpB | VFG2084 | Protein | 5e-96 | 42 |
