Gene Information

Name : SCAB_42051 (SCAB_42051)
Accession : YP_003489824.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Virulence
Product : two component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 4736158 - 4736823 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence :
ATGACGATCCGCGTGCTGATCGCCGACGACCAGATGATGGTCCGAGAGGGCTTCTCCGTACTGCTCAACGCGATGCCGGA
CATCGAGGTGGTCGGCGAGGCGGTGAACGGCCGGGAGGCGGTCCGACGGGTCCGGGAGCTGTCGCCGGACGTGGTCCTGA
TGGACATCCGGATGCCCGAGCTGAACGGCATCGAGGCCACCCGGGAGATCGTGGCGTCGGACGACGGGGCGAAGGTGCTG
GTCCTGACCACGTTCGACCTCGACGAGTACGTCTACCAGGCACTGCGGGCGGGAGCCTCCGGCTTCCTCCTCAAGGACGC
CTCGGCCCGCCAACTGGCCGACGGGGTGCGGGTGGTCGCCGCCGGGGAGGCGCTGCTCGCCCCGTCCGTCACCAAGCGGC
TGATCACCGAGTTCTCCAAACTGGTCCAGGCCCCCCGTCCCTCGGCGGCCACCCAGCTGGCGTACGGCGAACTCACCGAC
CGGGAGACCGAGGTGCTGGTTCTCATCGCCCAGGGTCTGTCCAATTCGGAGATCGCCGAGCGCCTGGTGGTCGCCGAGTC
CACGATCAAGACGCATGTGAGCCGGGTCCTGGTGAAGCTGGGTCTGCGGGACCGCACCCAGGCGGCGGTGTTCGCCTACG
AGGCGCGGCTGGTCACCCCCGGCTGA

Protein sequence :
MTIRVLIADDQMMVREGFSVLLNAMPDIEVVGEAVNGREAVRRVRELSPDVVLMDIRMPELNGIEATREIVASDDGAKVL
VLTTFDLDEYVYQALRAGASGFLLKDASARQLADGVRVVAAGEALLAPSVTKRLITEFSKLVQAPRPSAATQLAYGELTD
RETEVLVLIAQGLSNSEIAERLVVAESTIKTHVSRVLVKLGLRDRTQAAVFAYEARLVTPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 5e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_42051 YP_003489824.1 two component system response regulator VFG1824 Protein 4e-32 42