Gene Information

Name : SCAB_40161 (SCAB_40161)
Accession : YP_003489645.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4509900 - 4510595 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence : 
GTGCACGGCCGGGGCGCGAACGCGGTCACCGCGCTGCACGAGGTCAGCCACGACTTCCCCGAAGGGACCTTCACGGCCGT
CATGGGGCCGTCCGGTTCCGGCAAGTCCACCCTCATGCACTGCGCGGCCGGTCTGGAGCCGCCCACCTCGGGCGGCGTCA
TGATCGGCGGCCGGGACATCGCGGGCTGGTCCGAACGGCGGCTGACCCGGTTGCGCCGCACCCGCATCGGTTTCGTCTTC
CAGGAGTTCAACCTGGTCCCGGCCCTGAACGTGGCCGACAACGTGGCGCTGCCGCTGCGGCTGGCCGGGCGCAGGCCCGA
CTCCGCGCGGCTGGCCGACCTGCTCTCCCGTGTCGGTCTCGCCGACCGCCGCCGGCACCGGCCGGCGGAGCTCTCGGGCG
GGCAGCAGCAGCGGGTGGCGGTGGCCCGGGCACTCGTGGCACAACCCGAGGTCGTCTTCGCCGACGAGCCGACCGGTGCG
CTGGACCGGGCCTCGGGCCGCGATGTCCTGGCCCTGCTGCGCGACGCCGTCGACGGCCTCGGCACCACCGTCGTCATGGT
GACCCACGACCCGCAGGCGGCGGCCTGGGCGGACGAGGTGCTGGTCCTCGCGGACGGCAGACTCGCGGACCGGCTGACCG
GAAAGAGCGTCACACCCGACACGATCGCGGCGCGGCTCGCCGCGGTGGGGAGCTGA

Protein sequence : 
MHGRGANAVTALHEVSHDFPEGTFTAVMGPSGSGKSTLMHCAAGLEPPTSGGVMIGGRDIAGWSERRLTRLRRTRIGFVF
QEFNLVPALNVADNVALPLRLAGRRPDSARLADLLSRVGLADRRRHRPAELSGGQQQRVAVARALVAQPEVVFADEPTGA
LDRASGRDVLALLRDAVDGLGTTVVMVTHDPQAAAWADEVLVLADGRLADRLTGKSVTPDTIAARLAAVGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-18 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_40161 YP_003489645.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-32 48
SCAB_40161 YP_003489645.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-33 48
SCAB_40161 YP_003489645.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-34 47
SCAB_40161 YP_003489645.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-32 43