Gene Information

Name : SCAB_40061 (SCAB_40061)
Accession : YP_003489636.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4495370 - 4496122 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence : 
GTGGCCGCCCTCGACGGGGTGGACCTCGATTTCGGGGCCGGGACCTTCACGGCGGTCATGGGGCCGTCGGGGTCGGGGAA
GTCGACGCTGCTGCAGTGCGCGGCGGGGCTGGACCGGCCCTCCGGCGGGACGGTCCAGGTCGACGGGGTCGAGTTGGCCG
GGCTGAGTGAGCGGCGGCTGACGCTGCTGCGCCGGGAGCGGATCGGGTTCGTGTTCCAGGCGTTCAACCTGCTTCCCTCG
CTCACCGCCGCGCAGAACGTCGCCCTGCCGCTGCGGCTCGCCGGGCGGCGGCCCGCGCGGGGCGCGGTGCGCGAGGCGCT
GGCCCGGGTGGGGCTGGCCGAGCGGGCCGGACACCGGCCGGCCCAGCTGTCCGGCGGGCAGCAGCAGCGGGTCGCCCTGG
CCCGGGCCCTGATCACCCGCCCGGCGGTCCTCTTCGGCGACGAGCCCACCGGGGCGCTCGACACCACGACCAGCCGTGAA
GTGCTGTGCCTGCTCCGGGAGTTGGTGGACCGGGAGGGGCAGACCACGGTCATGGTGACGCACGATCCGGTGGCGGCGTC
GTACGCGGACCGGGTGGTGTTCCTGGTGGACGGGCGGGTGAGCGGGGAACTGGCCCGGCCCACGGTGGAGGCGGTGGCGG
CGCGGATGGCGGGGCTGGAACGGCGGGCCGGGGGCGCCCCGGCCGGAACCGCGACCGGCACTGCCGCCGGGAGCGCGGCC
GGGACCGCCGTGGCCGGGGGTGTGACGTGCTGA

Protein sequence : 
MAALDGVDLDFGAGTFTAVMGPSGSGKSTLLQCAAGLDRPSGGTVQVDGVELAGLSERRLTLLRRERIGFVFQAFNLLPS
LTAAQNVALPLRLAGRRPARGAVREALARVGLAERAGHRPAQLSGGQQQRVALARALITRPAVLFGDEPTGALDTTTSRE
VLCLLRELVDREGQTTVMVTHDPVAASYADRVVFLVDGRVSGELARPTVEAVAARMAGLERRAGGAPAGTATGTAAGSAA
GTAVAGGVTC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-28 50
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 49
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 49
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 49
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-19 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_40061 YP_003489636.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-28 50
SCAB_40061 YP_003489636.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-35 48
SCAB_40061 YP_003489636.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-29 47
SCAB_40061 YP_003489636.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-30 45
SCAB_40061 YP_003489636.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 5e-26 41