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Name : SCAB_39491 (SCAB_39491) Accession : YP_003489580.1 Strain : Streptomyces scabiei 87.22 Genome accession: NC_013929 Putative virulence/resistance : Virulence Product : Clp family ATP-binding protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4437138 - 4439663 bp Length : 2526 bp Strand : - Note : - DNA sequence : ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGGCAGGGGCAGCAGGCTCCGTCCGGCCACATCCCCTTC ACCCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTTCAGCTGGGCCACAACTACATCGGCACGGAGCA CATCCTGCTCGGCCTGATCCGTGAGGGCGAGGGCGTCGCCGCCCAGGTCCTGGTCAAGCTGGGCGCTGATCTCAACCGGG TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGTTACCAGGGCAAGGAGACCGCCACCGCCGGCGGCCCCGCCGAGGGCACC CCCTCGACGTCCCTGGTCCTCGACCAGTTCGGCCGGAACCTCACCCAGGCCGCTCGTGAGTCCAAGCTCGACCCGGTCAT CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTGCTGATCGGTGAGC CCGGCGTCGGCAAGACCGCCGTCGTGGAGGGCCTCGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC AAGCACCTCTACACCCTCGACCTCGGCGCGCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA GGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCGGTGCGGGTGCCG CCGAGGGCGCCATCGACGCCGCCTCGATCCTGAAGCCGATGCTGGCCCGCGGTGAACTGCAGACCATCGGTGCCACCACG CTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCGGCCCTGGAGCGCCGCTTCCAGCCCATCCAGGTCGCCGAGCCCTC GCTCCCGCACACCATCGAGATCCTCAAGGGCCTCCGTGACCGGTACGAGGCGCACCACCGCGTCTCCATCACGGACGAGG CCCTGGTGCAGGCGGCGACGCTCGCCGACCGGTACATCTCGGACCGCTTCCTCCCGGACAAGGCGATCGACCTGATCGAC GAGGCCGGCTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTCCGCGAGTTCGACGAGAAGATCGCCGGCGT CCGCCGCGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCCGCCTCCCTGCGCGACAAGGAGAAGCAGCTCC TGGCCGCCAAGGCCAAGCGCGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC GCCGAGGTCCTCGCGACCGCCACCGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCGCGTCTGCTGCGCATGGA GGACGAGCTCCACAAGCGGGTCATCGGCCAGGTCGACGCCGTCAAGGCGCTGTCGAAGGCGATCCGTCGTACGCGTGCGG GCCTCAAGGACCCGAAGCGCCCCGGTGGTTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTGTCCAAG GCGCTCGCCGAGTTCCTCTTCGGTGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT CTCCCGTCTCTTCGGTTCGCCCCCCGGTTACGTGGGCTACGAAGAGGGCGGCCAGCTGACCGAGAAGGTCCGCCGCAAGC CGTTCTCCGTCGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTGCAGATCCTGGAGGAC GGTCGCCTGACCGACTCGCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCACCCG GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCGGCCTCGGGCGACAAGAAGACCAACTACGAGCGCATGAAGAACAAGG TCTCGGACGAGCTGAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGTGTCGACGACGTCGTCGTCTTCCCGCAGCTGACG CAGGAGGACATCCTCAAGATCGTCGACCTGATGATCGGCAAGGTCGACGAGCGCCTCAAGGACCGGGACATGGGCATCGA GCTCTCCCAGGCCGCGAAGGAACTGCTGTCCAAGAAGGGCTATGACCCGGTGCTGGGTGCGCGACCGCTGCGTCGCACCA TCCAGCGCGAGGTCGAGGACACCCTCTCCGAGAAGATCCTCTTCGGCGAGCTGCGCCCCGGCCACATCGTGGTCGTGGAC ACCGAGGGCGAGGGCGACGCGGCCACCTTCACCTTCCGGGGTGAGGAGAAGTCGGCGCTGCCGGACGTCCCGCCGATCGA GCAGGCGGCCGGCGGTGCGGGCCCGAACCTGAGCAAGGACGCGTAA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKETATAGGPAEGT PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELI AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK ALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAASGDKKTNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLT QEDILKIVDLMIGKVDERLKDRDMGIELSQAAKELLSKKGYDPVLGARPLRRTIQREVEDTLSEKILFGELRPGHIVVVD TEGEGDAATFTFRGEEKSALPDVPPIEQAAGGAGPNLSKDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 75 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SCAB_39491 | YP_003489580.1 | Clp family ATP-binding protease | VFG0079 | Protein | 0.0 | 62 |
| SCAB_39491 | YP_003489580.1 | Clp family ATP-binding protease | VFG0080 | Protein | 4e-151 | 52 |
