Gene Information

Name : SCAB_34751 (SCAB_34751)
Accession : YP_003489118.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3920531 - 3921967 bp
Length : 1437 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTTCCGCATTCGAGTACGCACCGGCCCCCGAGTCCCGGGCGGTCGTCGACATCGCCCCCTCGTACGGCCTGTTCAT
CGACGGCGAGTTCACCGAGGCCGCCGACGGCAAGGTCTTCAAGACGGTCAGCCCCTCCTCCGAGGAGGTCCTCTCCGAGA
TCGCCCGGGCGGGCGAGGCGGACGTGGACCGCGCGGTGGCGGCGGCCCGCAAGGCGTTCGAGAAGTGGTCCGCGCTGCCC
GGCGCGGAGCGCGCGAAGTACCTCTTCCGCATCGCCCGCATCATCCAGGAGCGCAGCCGCGAACTGGCCGTCCTGGAGAC
CCTGGACAACGGCAAGCCCATCAAGGAGACGAGGGACGCCGACCTCCCCCTGGTCGCCGCGCACTTCTTCTACTACGCGG
GCTGGGCCGACAAGCTGGACCACGCCGGTTACGGCGCGAACCCCCGCCCGCTGGGCGTGGCGGGCCAGGTCATCCCCTGG
AACTTCCCGCTGCTGATGCTGGCGTGGAAGATCGCCCCGGCGCTGGCCACCGGCAACACGGTGGTCCTGAAGCCCGCCGA
GACGACCCCCCTGTCGGCGCTGTTCTTCGCGGACATCTGCCGCCAGGCGGGCCTGCCGAAGGGTGTCGTCAACATCCTCC
CCGGCTACGGCGACACGGGCGCGGCCCTGGTCGCTCACCCGGACGTGAACAAGGTCGCCTTCACCGGCTCCACGGCGGTC
GGCAAGCAGATCGCGCGGACGGTCGCGGGCACCCGCAAGAAGGTCACGCTCGAACTGGGCGGCAAGGGCGCGAACATCGT
CTTCGACGACGCCCCGATCGACCAGGCCGTCGAGGGCATCGTGACCGGCATCTTCTTCAACCAGGGCCAGGTCTGCTGCG
CGGGCAGCCGCCTGCTGGTCCAGGAGTCGATCCAGGACGAGCTGCTCGACTCCCTCAAGCGCCGTCTGTCGACGCTGCGC
CTCGGCGACCCCCTCGACAAGAACACGGACATCGGGGCGATCAACTCCGAGGAGCAGCTCACCCGGATCACCTCGCTCGT
CGAGCGCGGCGAGGCCGAGGGCGCCGAGCGCTGGTCCCCGGCCTGCGAACTGCCGTCCGCGGGCTACTGGTTCGCCCCGA
CGCTGTTCACGAACGTCGCCCAGGCGCACACCATCGCGCGGGACGAGATCTTCGGCCCGGTCCTGTCCGTCCTCACCTTC
CGCACCCCGGACGAGGCCGTCGCCAAGGCCAACAACACCCAGTACGGCCTCTCGGCGGGCATCTGGACCGAGAAGGGCTC
CCGGATCCTGGCCGTCGCGAACAAGCTGCGCGCGGGCGTCGTCTGGTCCAACACGTTCAACAAGTTCGACCCGACGTCGC
CGTTCGGCGGCTACAAGGAGTCGGGCTTCGGCCGCGAGGGCGGCCGCCACGGCCTGGAGGCGTACCTCGATGTCTGA

Protein sequence : 
MASAFEYAPAPESRAVVDIAPSYGLFIDGEFTEAADGKVFKTVSPSSEEVLSEIARAGEADVDRAVAAARKAFEKWSALP
GAERAKYLFRIARIIQERSRELAVLETLDNGKPIKETRDADLPLVAAHFFYYAGWADKLDHAGYGANPRPLGVAGQVIPW
NFPLLMLAWKIAPALATGNTVVLKPAETTPLSALFFADICRQAGLPKGVVNILPGYGDTGAALVAHPDVNKVAFTGSTAV
GKQIARTVAGTRKKVTLELGGKGANIVFDDAPIDQAVEGIVTGIFFNQGQVCCAGSRLLVQESIQDELLDSLKRRLSTLR
LGDPLDKNTDIGAINSEEQLTRITSLVERGEAEGAERWSPACELPSAGYWFAPTLFTNVAQAHTIARDEIFGPVLSVLTF
RTPDEAVAKANNTQYGLSAGIWTEKGSRILAVANKLRAGVVWSNTFNKFDPTSPFGGYKESGFGREGGRHGLEAYLDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA ACK75580.1 aldehyde dehydrogenase Not tested VPI Protein 4e-50 43
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 7e-51 43
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 4e-51 43
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 4e-50 43
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 2e-50 43
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 2e-50 43
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 7e-51 43
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 7e-51 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-71 43
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 5e-51 43
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-67 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-73 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-73 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-73 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-73 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_34751 YP_003489118.1 aldehyde dehydrogenase VFG0082 Protein 3e-71 43