Gene Information

Name : metB (SCAB_34371)
Accession : YP_003489084.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 3878709 - 3879863 bp
Length : 1155 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGACAGCCACACCAGCCAGCACTTCGAGACCCTCGCGATCCACGCGGGCAACACCGCGGATCCCCTCACCGGCGC
GGTCGTCCCGCCGATCTACCAGGTCTCGACCTACAAGCAGGACGGCGTAGGGGGCCTGCGCGGCGGCTACGAGTACAGCC
GCAGCGCCAACCCCACCCGCACCGCGCTGGAGGAGAACCTCGCCGCCCTGGAGGGCGGCCGCCGCGGTCTCGCGTTCGCG
TCCGGCCTGGCAGCCGAGGACTGCCTGCTGCGCACGCTGCTCAGCCCCGGCGATCACGTGGTCATCCCCAACGACGCCTA
CGGCGGCACCTTCCGCCTCTTCGCCAAGGTCGTCTCCCGCTGGGGCGTGGACTGGTCGGTGGCCGACACCTCCGACCCGG
CGGCCGTCCGGGCCGCCCTCACCCCGAGGACGAAGGTCGTCTGGGTGGAGACCCCCTCCAACCCGCTGCTCGGGATCACC
GACATCCCGGCCGTCGCCCAGATCGCCCGCGAGGCCGGCGCGAAACTGGTCGTCGACAACACCTTCGCCACCCCCTACCT
GCAGCAGCCGCTCGCGCTCGGCGCGGACGTCGTCGTGCACTCGCTCACCAAGTACATGGGCGGCCACTCCGACGTCGTCG
GCGGCGCGCTGATCGTCGGTGACCGGGAACTGGGCGAGGAACTGGCGTACCACCAGAACGCGATGGGCGCCGTCGCCGGC
CCCTTCGACTCCTGGCTGGTGCTGCGCGGCACCAAGACCCTCGCCGTCCGCATGGACCGGCACAGCGAGAACGCCGTCAA
GGTCGCCGACATGCTCACCCGGCACGCGCGCGTGTCGAGCGTGCTCTACCCGGGCCTGCCCGAGCACCCCGGGCACGAGG
TCGCCGCCAAGCAGATGAAGGCGTTCGGCGGCATGGTGTCGTTCCGGGTCACCGGCGGCGAGGAGGCGGCCGTCGAGGTC
TGCAACCGCGCCAAGGTGTTCACCCTCGGCGAGTCCCTGGGCGGAGTGGAGTCCCTGATCGAGCACCCGGGACGCATGAC
GCACGCCTCGGTGGCCGGATCGGCCCTGGAGGTCCCCGCCGACCTCGTCCGCCTCTCCGTGGGCATCGAGAACGTCGACG
ACCTGCTGGAGGACCTGCAGCAGGCCCTCGGCTAG

Protein sequence :
MSDSHTSQHFETLAIHAGNTADPLTGAVVPPIYQVSTYKQDGVGGLRGGYEYSRSANPTRTALEENLAALEGGRRGLAFA
SGLAAEDCLLRTLLSPGDHVVIPNDAYGGTFRLFAKVVSRWGVDWSVADTSDPAAVRAALTPRTKVVWVETPSNPLLGIT
DIPAVAQIAREAGAKLVVDNTFATPYLQQPLALGADVVVHSLTKYMGGHSDVVGGALIVGDRELGEELAYHQNAMGAVAG
PFDSWLVLRGTKTLAVRMDRHSENAVKVADMLTRHARVSSVLYPGLPEHPGHEVAAKQMKAFGGMVSFRVTGGEEAAVEV
CNRAKVFTLGESLGGVESLIEHPGRMTHASVAGSALEVPADLVRLSVGIENVDDLLEDLQQALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-81 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-82 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 9e-64 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_003489084.1 cystathionine gamma-synthase BAC0207 Protein 2e-67 45