Gene Information

Name : SCAB_23991 (SCAB_23991)
Accession : YP_003488073.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Virulence
Product : turgor pressure regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2715530 - 2716213 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence :
ATGACCCGGGTGCTCGTGGTCGACGACGAGCCGCAGATCGTGCGGGCCCTCGTGATCAACCTCAAGGCACGCGCGTACGA
GGTGGACGCGGCCCACGACGGCGCGACCGCCCTCGCACTCGCCGCCGCGCGCCACCCCGACGTCGTGATCCTCGACCTCG
GGCTGCCCGACATGGACGGCGTCGAGGTGATCGACGGACTGCGCGGCTGGACCCGGGTGCCGATCATCGTGCTCTCCGCC
CGCCACACCTCCGACGAGAAGGTCGAGGCACTGGACGCCGGGGCCGACGACTACGTCACCAAACCCTTCGGCATGGACGA
ACTGCTCGCCCGGCTGCGCGCCGCCGTCCGGCGCGCCGAGCCCGTCGGGGGCGAGGAGGGCGACGTGATCGTCGAGACCG
GCGACTTCACCGTGGACCTGGCCGCCAAGAAGGTGAACCGGGACGGCAGGGACGTCCGGCTGACCCCCACCGAGTGGCAC
CTCCTGGAGGTACTGGTCCGCAACACCGGGCGCCTGGTCGGCCAGAAGCAGCTGCTCCAGGAGGTCTGGGGGCCTTCGTA
CGGGACGGAGACCAACTACCTCCGGGTCTACATGGCCCAGCTGAGGCGCAAGCTGGAGCGCGATCCTTCGCGGCCGAGGC
ACTTCATCACCGAGGCGGGGATGGGGTACCGCTTCGAGAAGTAG

Protein sequence :
MTRVLVVDDEPQIVRALVINLKARAYEVDAAHDGATALALAAARHPDVVILDLGLPDMDGVEVIDGLRGWTRVPIIVLSA
RHTSDEKVEALDAGADDYVTKPFGMDELLARLRAAVRRAEPVGGEEGDVIVETGDFTVDLAAKKVNRDGRDVRLTPTEWH
LLEVLVRNTGRLVGQKQLLQEVWGPSYGTETNYLRVYMAQLRRKLERDPSRPRHFITEAGMGYRFEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 3e-33 41
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 4e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_23991 YP_003488073.1 turgor pressure regulator VFG1390 Protein 1e-27 45