Gene Information

Name : SCAB_21921 (SCAB_21921)
Accession : YP_003487869.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3547
EC number : -
Position : 2498824 - 2500026 bp
Length : 1203 bp
Strand : -
Note : -

DNA sequence : 
TTGGACGACATCGACGACGTGGGCGTCTTCCTCGGCCTGGACGTCGGCAAGAGCGCCCACCACGGGCACGGCCTCACCAC
GGCCGGCAAGAAGGTCTTCGACAAGCAGCTACCCAACAGTGAGCCCAAGCTGCGGGCCGTCTTCGACAAGCTGACCGCAA
AGTTCGGCACCGTGCTGGTGATCGTGGACCAGCCCGCCTCGATCGGGGCCCTGCCCCTGACAGTCGCCCGGGCCGCCGGC
TGCAAGGTCGCCTACCTGCCCGGGCTCTCGATGCGGCGAATCGCCGACCTCTACCCGGGCGAGGCGAAAACCGACGCCAA
GGACGCCGCGGTGATCGCGGACGCCGCGAGGACGATGCCGCACACCCTGCGCTCGCTCCAGCTGACCGACGAGATCACCG
CCGAGCTGACCGTGCTGGTGGGCTTCGACCAGGACCTCGCGGCCGAGGCCACCCGCACATCCAACCGGATACGCGGCCTG
CTCACCCAGTTCCACCCCAGCCTCGAGCGCGTCCTCGGACCGCGCCTGGACCACCCCGCGGTGACCTGGCTGCTGGAACG
CTACGGCTCCCCGGCCGCCCTGCGAAAAGCCGGACGCCGCAGGCTCGTTGAGGTCATCCGGCCCAAGGCCCCGCGCATGG
CCCAGCGGTTGATCGACGAGGTGTTCGACGCGCTCGACGAGCAGACCGTCGTGGTCCCGGGCACCGGCACTCTCGACCTC
GTGATCCCGTCGCTGGTCCGTTCGCTCGCTGCCGTCCACGAACAGCGACGGGCCCTGGAGGCGCAGATCGGGAAGCTGCT
GGAGGCTCACCCTCTTTCCGCGGTCCTGACCTCGATTCCGGGGGTCGCGGTCAGGACCGCCGCCACCTTGCTGGTCACCG
TCGGCGACGGCACCAGCTTCCCCACCGCTGCCCACCTGGCCTCCTACGCCGGTCTTGCGCCGACGACGAAGTCGTCGGGG
ACCTCGATCCACGGCGAACACGCGCCACGAGGCGGCAACCGGCAGCTGAAACGCGCGATGTTCCTGTCCGCGTTCGCCGC
GCTGCACGATCCCGCCTCCCGCACCTACTACGACCGCTGCCGGGCCCGCGGGAAGACCCACACCCAGGCACTTCTCCGCC
TGGCCCGCCAGCGGATCAACGTGCTGTTCGCGATGCTCCGCGACGGCACGTTCTACGAACCCCGAACCCCACGCCTCGCT
TGA

Protein sequence : 
MDDIDDVGVFLGLDVGKSAHHGHGLTTAGKKVFDKQLPNSEPKLRAVFDKLTAKFGTVLVIVDQPASIGALPLTVARAAG
CKVAYLPGLSMRRIADLYPGEAKTDAKDAAVIADAARTMPHTLRSLQLTDEITAELTVLVGFDQDLAAEATRTSNRIRGL
LTQFHPSLERVLGPRLDHPAVTWLLERYGSPAALRKAGRRRLVEVIRPKAPRMAQRLIDEVFDALDEQTVVVPGTGTLDL
VIPSLVRSLAAVHEQRRALEAQIGKLLEAHPLSAVLTSIPGVAVRTAATLLVTVGDGTSFPTAAHLASYAGLAPTTKSSG
TSIHGEHAPRGGNRQLKRAMFLSAFAALHDPASRTYYDRCRARGKTHTQALLRLARQRINVLFAMLRDGTFYEPRTPRLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0055 CAD33753.1 putative IS110 transposase Not tested PAI I 536 Protein 1e-96 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_21921 YP_003487869.1 transposase VFG1494 Protein 6e-97 58