Gene Information

Name : SCAB_18441 (SCAB_18441)
Accession : YP_003487536.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 2077893 - 2079101 bp
Length : 1209 bp
Strand : +
Note : -

DNA sequence :
ATGGAGTTCCGGCAGTCGAGCAAGCTCAGCGAGGTCTGTTACGAGATCCGCGGACCCGTGATCGAGCAGGCGAACGCACT
GGAGGAGGCGGGCCACAGCGTCCTGCGCCTCAACACCGGCAACCCCGCGCTCTTCGGCTTCGAGGCACCGGAGGAGATCC
TCCAGGACATGATCCGGATGCTGCCGAGGGCCCACGGCTACACGGACTCGCGCGGCGTCCTCTCGGCCCGCCGCGCGGTC
GCCCAGCGCTACCAGGACCGGGGCCTGGACGTCGACGTGGACGACGTCTTCCTCGGCAACGGCGTCTCCGAGCTGGTCTC
CATGGCCGTCCAGGCGCTGATCGAGGACGGCGACGAGATCCTGATCCCGGCCCCCGACTTCCCCCTGTGGACGGCGGTCA
CCACCCTCGCCGGCGGCAATGCGGTGCACTACCTCTGCGACGAACAGGCCGACTGGTACCCGGACCTGGACGACATGGCG
TCGAAGATCACCGACCGCACCAGGGCCGTCGTCATCATCAACCCCAACAACCCCACCGGCGCGGTCTACCCGAAGGAGAT
CATCGAGGGCATCCTCGACCTCGCCCGCCGCCACGGCCTGATGGTCTTCGCCGACGAGATCTACGACCAGATCCTGTACG
ACGACGCCGTGCACCACTCGGCCGCCGCGCTCGCCCCCGACCTGGTCGTCCTCACCTTCTGCGGCCTGTCGAAGACCTAC
CGCGTCGCGGGCTTCCGCTCCGGGTGGCTGGTCGTCACCGGCCCGCGACAGCACGCCCGCAACTATCTGGAGGGACTGAC
GATGCTGGCCTCCATGCGGCTGTGCGCCAACGCGCCCGCCCAGTACGCCATCCAGGCCGCGCTCGGCGGCCGCCAGTCCA
TCACCGAGCTGACGACGCCGGGCGGCCGTCTGTACGAACAGCGCGACGTGGCTTGGGAGAAGCTCAACGAGATCCCCGGT
GTCTCCTGCGTGAAGCCCAAGGGCGCCCTCTACGCCTTCCCCCGGCTCGACCCCAAGGTGCACAAGATCCACGACGACGA
GAGGTTCGTCCTGGACCTGCTCCTGCGCGAGAAGATCCAGGTCGTCCAGGGCACCGGCTTCAACTGGCCCGCCCCCGACC
ACTTCCGCATCCTCACCCTCCCCCACGCGGACGACCTGGACGCGGCGATCAGCCGCATCGGCCGGTTCCTGAGCGGGTAC
CGGCAGTAG

Protein sequence :
MEFRQSSKLSEVCYEIRGPVIEQANALEEAGHSVLRLNTGNPALFGFEAPEEILQDMIRMLPRAHGYTDSRGVLSARRAV
AQRYQDRGLDVDVDDVFLGNGVSELVSMAVQALIEDGDEILIPAPDFPLWTAVTTLAGGNAVHYLCDEQADWYPDLDDMA
SKITDRTRAVVIINPNNPTGAVYPKEIIEGILDLARRHGLMVFADEIYDQILYDDAVHHSAAALAPDLVVLTFCGLSKTY
RVAGFRSGWLVVTGPRQHARNYLEGLTMLASMRLCANAPAQYAIQAALGGRQSITELTTPGGRLYEQRDVAWEKLNEIPG
VSCVKPKGALYAFPRLDPKVHKIHDDERFVLDLLLREKIQVVQGTGFNWPAPDHFRILTLPHADDLDAAISRIGRFLSGY
RQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 5e-121 62
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-121 62
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-121 62
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-121 62