Gene Information

Name : SCAB_14321 (SCAB_14321)
Accession : YP_003487150.1
Strain : Streptomyces scabiei 87.22
Genome accession: NC_013929
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3547
EC number : -
Position : 1597557 - 1598759 bp
Length : 1203 bp
Strand : +
Note : -

DNA sequence :
TTGAACGAGTACGACGAGACAGGCGTCTTCCTGGGCCTGGGTGTCGGGAAGAGCGCTCACCACGGCCACGGACTCACCCC
GGCTGGCAAGAAGGTCTTCGACAAGCAGCTGCCCAACACCGAACCGAAGCTGAGGCAGGTCTTCGACAAGCTCCGCGAGA
AGTTCGGCACCGTCCTGGTCGTCGTGGACCAGCCGGCCTCCATCGGCGCTCTGCCGCTGACGGTGGCCCGCGACACGGGC
TGCCAGGTCGCCTACCTGCCGGGCCTGTCGATGCGGCGGATCGCTGACCTCTACCCGGGCGAGGCGAAGACCGACGCCCG
CGACGCGGCCGTCATCGCGGACGCCGCCCGCACCATGCCGCACACCCTGCGCTCGCTTCAGCTGACCGACGAGATCACCG
CCGAGCTCACCGTCCTCGTCGGCTTCGACCAGGACCTGGCGGCCGAGGCCACCCGCACCAGCAACCGCATCCGGGGCCTG
CTCACCCAGTTCCACCCCTCCCTGGAACGGGTCCTGGGCCCACGTCTGGATCACCAGGCGGTCACCTGGCTGCTGGAACG
CTACGGATCCCCGGCCGCGCTGCGAAAGGCCGGACGCCGCAGGCTGGTCGAGGTAATCCGGCCCAAAGCCCCGCGCATGG
CAAAGCGGCTGATCGACGACGTCTTCGAGGCGCTCGACGAGCAGACCGTCGTGGTCCCGGGCACCGGCACCCTGGATGTC
GTGATCCCGTCGCTGACCCGCTCGCTCGGCGCCGTTCGCGAACAAAGACGGGCGGCAGAAGCCCAGATCACAGCCCTGCT
GGAGGACCACCCTCTTTCCAAGGTCCTGACGTCGCTGCCCGGCGTCGGCGTCAGGACCGCCGCCGCACTGCTGGTCACCG
TCGGCGACGGCACCAGCTTCCCCACCGCCGCCCACCTCGCCTCCTACGCCGGCCTCGCCCCGACCACAAAGTCGTCCGGG
ACCTCGATCCATGGCGAACACGCACCCAGAGGCGGCAACCGGCAGCTCAAACGCGCGATGTTCCTCTCCGCGTTCGCCGC
CCTGCACGATCCCGCCTCCCGCACCTACTACGACCGATGCCGGGCCCGCGGAAAGACCCACACCCAGGCACTCCTCCGCC
TCGCCCGGCAACGCATCAACGTGCTGTTCGCGATGCTCCGCGACGGCACCTTCTACGAACCCCGAACCCCCCGCCTCGCT
TGA

Protein sequence :
MNEYDETGVFLGLGVGKSAHHGHGLTPAGKKVFDKQLPNTEPKLRQVFDKLREKFGTVLVVVDQPASIGALPLTVARDTG
CQVAYLPGLSMRRIADLYPGEAKTDARDAAVIADAARTMPHTLRSLQLTDEITAELTVLVGFDQDLAAEATRTSNRIRGL
LTQFHPSLERVLGPRLDHQAVTWLLERYGSPAALRKAGRRRLVEVIRPKAPRMAKRLIDDVFEALDEQTVVVPGTGTLDV
VIPSLTRSLGAVREQRRAAEAQITALLEDHPLSKVLTSLPGVGVRTAAALLVTVGDGTSFPTAAHLASYAGLAPTTKSSG
TSIHGEHAPRGGNRQLKRAMFLSAFAALHDPASRTYYDRCRARGKTHTQALLRLARQRINVLFAMLRDGTFYEPRTPRLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0055 CAD33753.1 putative IS110 transposase Not tested PAI I 536 Protein 3e-94 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCAB_14321 YP_003487150.1 transposase VFG1494 Protein 2e-94 59