|
Name : SCAB_1351 (SCAB_1351) Accession : YP_003485932.1 Strain : Streptomyces scabiei 87.22 Genome accession: NC_013929 Putative virulence/resistance : Unknown Product : integrase component Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 140479 - 141396 bp Length : 918 bp Strand : + Note : - DNA sequence : GTGACGGCGCTCGTTGACGAGCATCCCCGCCTGGGAGTCGAGTGCGTCCTGCGGGAACTGCACATCCCCTCCTCCACCTA CTACCGCTGGCGCCGCGCGGAGAAGGAACCGTGCGAACGGCGACGCCGCGACGTCGAACTGGCCGAGCGGATCAAGGAGA TCCACGCGGAGTCCGGCGGCAATTACGGATCGCCGCGCGTGCACGCCGTCCTCAGACGCGAGGGCACACGCGTGGGCCGC AAGCGGGTCGAGCGCCTGATGCGCGAGGCCGACATCGCGGGGATCAGCCCGCGGCGGAAGGGCTTCACGCGCCGCGATCC CAAGGCCAGCCTCGCCCCGGACCTGGTCAACCGGGACTTCACCGCACCGGCGCCGAACCGGTTGTGGGTCACCGACCTCA CGATGGTCTCCACCGGCGAGGGACCGTTGTGGCTCTCCGCGATCCGGGACGCATTCTCCCGGCGGGTGGTCGCGTGGGAG ACCTCCGCCCGCGCGGACGCCGACCTGGTCCTGACCACGCTGGAGTACGCGCTCGCGTCCCGCGAGGTCGAGCCGGGCAA GCTCATCCACCACGCCGACCACGGCTGTCAGTACACGTCCATCAAGCTCACAACCCGGCTGATGCGGGCGGGAGTTGAGG CGTCCATGGGCTCCGTCGGGGACTCGTACGACAACGCCCTCGCGGAGAACCTCTGGATGCTCATCAAAACCGAGGGCCTC CGTGGCCGCACCTTCACCACGAGGGCCGAGGCGAATCTCGCGCTCTTCGAGTACATCGACGGCTTCTATAACTCCCGCCG CATCCAGGAACGGCTCGGCTTCCTCAGCCCGATCGAGTTCGAGGAGAAGTACTACGCCGAGCAGGCGACGGCCGAACCAA CGAATCTGAACACCCGTCAACCCCTGCTGACCAGCTGA Protein sequence : MTALVDEHPRLGVECVLRELHIPSSTYYRWRRAEKEPCERRRRDVELAERIKEIHAESGGNYGSPRVHAVLRREGTRVGR KRVERLMREADIAGISPRRKGFTRRDPKASLAPDLVNRDFTAPAPNRLWVTDLTMVSTGEGPLWLSAIRDAFSRRVVAWE TSARADADLVLTTLEYALASREVEPGKLIHHADHGCQYTSIKLTTRLMRAGVEASMGSVGDSYDNALAENLWMLIKTEGL RGRTFTTRAEANLALFEYIDGFYNSRRIQERLGFLSPIEFEEKYYAEQATAEPTNLNTRQPLLTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z4334 | NP_289559.1 | IS629 transposase | Not tested | OI-122 | Protein | 2e-25 | 42 |
| S4063 | NP_839232.1 | IS629 orfB | Not tested | SHI-2 | Protein | 1e-25 | 42 |
| unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 8e-30 | 42 |
| ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 6e-34 | 41 |
| Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 3e-33 | 41 |
| Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 3e-33 | 41 |
| Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 3e-33 | 41 |
