Gene Information

Name : lysS (SmuNN2025_1235)
Accession : YP_003485153.1
Strain : Streptococcus mutans NN2025
Genome accession: NC_013928
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 1303889 - 1305379 bp
Length : 1491 bp
Strand : +
Note : similar to (nr):(gi|24379232|ref|NP_721187.1|), BLASTP E():0, 99.8% identity in 496 aa overlap.

DNA sequence : 
ATGTCACATCAACATACAGAAGAATTGAATGACCAACAAATTGTCCGCCGCGAAAAAATGGCGGCTTTGACTGAACAAGG
AATAGATCCATTTGGCAAGCGTTTTGAACGTACGGCTACTTCTGGTCAATTAAAAGAAAAATATGCTGACAAAACAAAAG
AAGAATTACATGACATCAATGAAACAGCTACCATTGCTGGACGTCTGATGACCAAACGAGGTAAAGGTAAGGTTGGCTTT
GCCCACCTTCAAGACCGCGAGGGTCAAATTCAAATTTATGTCCGTAAAGATACTGTTGGCGATGATAATTATCAAATTTT
TAAAAAGGCGGATATTGGAGACTTTTTAGGTGTAGAAGGTGAAATTATGCGTACAGATATGGGAGAGCTTTCTATCAAAG
CTACGCATATAACGCATCTTTCCAAGGCACTGCGTCCACTGCCTGAAAAATTCCATGGTTTAACTGATGTTGAAACCATC
TACCGCAAGCGTTACCTCGATTTGATTTCTAACCGCGAGAGTCTGGAACGCTTTATCACTCGTTCAAAAATCATCTCAGA
AATCCGTCGCTATCTGGATGGCCTTGGTTTCTTAGAAGTAGAAACGCCTGTCCTTCATAATGAAGCTGGTGGTGCTGCTG
CTAAACCCTTCACAACCCATCATAACGCTCAAGATATGGATATGGTTCTTCGTATCGCAACAGAACTGCATTTAAAACGA
CTGATTGTTGGTGGTATGGAAAGAGTTTATGAAATGGGACGTATTTTCCGTAATGAAGGAATGGATGCCACTCATAATCC
TGAATTCACTTCAATTGAAGTTTACCAAGCCTATGCTGACTTTGAAGATATCATGGATTTAACAGAAGGTATTGTGCAAC
ATGCTGCTACAGCCGTTAAAGGTGATGGTCCTATTACTTATCAAGGTACCGAAATTAAGATTAATGAACCCTTCAAACGT
GCTCACATTGTTGATTTAATCAAGGAAGTGACTGGAGTTGATTTTTGGAAAGAAATGACCTTGGCGGAAGCACAGGCTCT
TGCTCAAGAAAAAAATGTTCCACTTGAAAAACACTACACTTCTGTTGGACACATTATCAATGCCTTCTTTGAAGAATTTG
TCGAAGAAACACTCATTCAACCAATCTTTGTTTATGGCCATCCTGTTGAAGTTTCACCACTAGCTAAGAAAAATGCAGAT
GACCCTCGTTTCACAGACCGTTTTGAACTTTTCATTATGACTAAGGAATACGGAAATGCCTTCACTGAATTAAATGACCC
AATTGATCAATTGGAGCGCTTTAAAGCTCAAGCCGCTGCCAAAGAATTGGGAGACGACGAAGCCACAGGCATTGACTATG
ACTATGTTGAAGCCCTTGAATACGGCATGCCACCAACAGGCGGACTCGGTATTGGTATTGACCGCTTAGTCATGCTCTTA
ACAGACACAACAACCATTCGTGATGTATTGTTATTCCCAACGATGAAGTAA

Protein sequence : 
MSHQHTEELNDQQIVRREKMAALTEQGIDPFGKRFERTATSGQLKEKYADKTKEELHDINETATIAGRLMTKRGKGKVGF
AHLQDREGQIQIYVRKDTVGDDNYQIFKKADIGDFLGVEGEIMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETI
YRKRYLDLISNRESLERFITRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNAQDMDMVLRIATELHLKR
LIVGGMERVYEMGRIFRNEGMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAVKGDGPITYQGTEIKINEPFKR
AHIVDLIKEVTGVDFWKEMTLAEAQALAQEKNVPLEKHYTSVGHIINAFFEEFVEETLIQPIFVYGHPVEVSPLAKKNAD
DPRFTDRFELFIMTKEYGNAFTELNDPIDQLERFKAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLL
TDTTTIRDVLLFPTMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-107 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_003485153.1 lysyl-tRNA synthetase VFG1668 Protein 2e-107 46