Gene Information

Name : Aboo_1346 (Aboo_1346)
Accession : YP_003483716.1
Strain : Aciduliprofundum boonei T469
Genome accession: NC_013926
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1292477 - 1293487 bp
Length : 1011 bp
Strand : -
Note : KEGG: afu:AF0508 pyridoxal biosynthesis lyase PdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; PcrB family protein

DNA sequence :
ATGCCATTTCATTTGGATCTGGAGAATGTTAGATACGGTAGTGAGCTCGTTAAGAGAGGCTTCGCCAAAATGCAGAAGGG
CGGAGTAATAATGGATGTTACGAATGCCGAGCAGGCCGGAATTGCTGAAGATGCTGGTGCTGTAGCAGTTATGGCTCTAG
AGCGTGTTCCCGCTGATATTCGTGCAGCAGGGGGAGTTGCAAGGATGGCGGATCCAAATAAGATTCAAGAGATTATGGAT
GCTGTTAGCATACCTGTTATGGCAAAGGTGCGTATTGGGCATATTGAAGAGGCCCGTGCATTAGAGGCGTTGGGAGTGGA
TATGATTGATGAGAGTGAGGTACTTACTCCCGCGGACCCGTTTTATCATATTGATAAAAGAGAATTTACCATTCCCTTCG
TTTGCGGTGCAAGAAATCTCGGGGAGGCAGTGCGCCGCATCTGGGAAGGTGCCGCTATGATAAGAACGAAGGGTGAGGCT
GGTACTGGCAATGTCATTGAGGCAGTTAGGCATATGCGCTTGGTTAATAGGGGAATAGAGGAGTTGAAATACAAAAATGA
TGCAGAAATATACAAAATTGCAAGAAAATATGCTGAATCTTATGAGAAGCTGTTAAAACAGGTTAAGGAGTTTAATGGTA
TGCCGTCGGATATAGACCCACATGAGCCTGTATTTGGAGAATACACAATAAACGATATTGTGGAAGGGCTCTACAAAGAA
TTGATGGAAATTAAAAAGCTCCAGCGTTTACCCGTTGTGAACTTTGCAGCGGGAGGCATAGCAACTCCACCAGATGCAGC
TTTAATGATGAACCTTGGAGCGGATGGCGTGTTTGTTGGAAGTGGAATATTCAAGAGCCCAAATCCTGAGGAAATGGCCC
GTGCAATAGTAGAGGCGGTCATGCATTACGATGAACCTGAGGTGATAGCTGAGGTATCCAAGGGACTCAAAGGAATGTAC
GGACAAGAAATCTCGCAACTCAACGAGAAACTTCAGGAGAGAGGATGGTAA

Protein sequence :
MPFHLDLENVRYGSELVKRGFAKMQKGGVIMDVTNAEQAGIAEDAGAVAVMALERVPADIRAAGGVARMADPNKIQEIMD
AVSIPVMAKVRIGHIEEARALEALGVDMIDESEVLTPADPFYHIDKREFTIPFVCGARNLGEAVRRIWEGAAMIRTKGEA
GTGNVIEAVRHMRLVNRGIEELKYKNDAEIYKIARKYAESYEKLLKQVKEFNGMPSDIDPHEPVFGEYTINDIVEGLYKE
LMEIKKLQRLPVVNFAAGGIATPPDAALMMNLGADGVFVGSGIFKSPNPEEMARAIVEAVMHYDEPEVIAEVSKGLKGMY
GQEISQLNEKLQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-70 55
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-70 55
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-70 55