Gene Information

Name : Aboo_1276 (Aboo_1276)
Accession : YP_003483646.1
Strain : Aciduliprofundum boonei T469
Genome accession: NC_013926
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1225081 - 1225794 bp
Length : 714 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pab:PAB1085 3-oxoacyl-[acyl-carrier-protein] reductase

DNA sequence :
ATGGAAAGGGTTGCTTTGGTTACTGGAGGAGATAGAGGGATTGGCAGGGCTATAAGCTTGGCACTCGCAAAAAGAGGATA
TTCCGTTGCAATTAATTACAGAAAAAATGAAGATAAGGCAGAGGAAACAAAGAAAATGATCGATGAAATTGGAGGTAGAG
CAATAACAATAAAATTTGATGTTTCAAAAAGAGATGAGGTGAGAGAAGGAGTTAAAAGAATAATGGATGAATTTGGGAGA
ATTGATGTGCTCATAAACAATGCAGGAATTCTAGGAAAGCATTCAAAATTTGATGAGATTGATGATAATGAGTGGGATGA
GGTTCTTGATACAAATCTAAAAGGCGCATTCATTGTAACACAGGAAGTTACAAAGTATATGAAGAATGGAAAGATTGTGA
ATATAGCGTCCATAGCAGGAAGAAATGGTGGCACAGTTGGAGTGCATTATGCCGCATCTAAAGCAGGATTAATCGGGTTG
ACTTTTGCTCTGGCTTCTCAGCTTGCTCCTAATATATTGGTGAACGGTGTGGCTCCCGGGCCTGTTGATACTGGGCTTCT
CAGTGAGGAGAAAAAGAAAGAGCTTTCAAAATTAACCCCCCTTGGAAGGGTAGCCAAGCCTGATGAAATCGCCCATGCAG
TAATATTCTTGCTTGAAAATGATTATCTCAATGGTACAATAATAGATATCAATGGCGGGAGATATATGCATTAA

Protein sequence :
MERVALVTGGDRGIGRAISLALAKRGYSVAINYRKNEDKAEETKKMIDEIGGRAITIKFDVSKRDEVREGVKRIMDEFGR
IDVLINNAGILGKHSKFDEIDDNEWDEVLDTNLKGAFIVTQEVTKYMKNGKIVNIASIAGRNGGTVGVHYAASKAGLIGL
TFALASQLAPNILVNGVAPGPVDTGLLSEEKKKELSKLTPLGRVAKPDEIAHAVIFLLENDYLNGTIIDINGGRYMH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 5e-21 42