Gene Information

Name : Nmag_3580 (Nmag_3580)
Accession : YP_003481692.1
Strain : Natrialba magadii ATCC 43099
Genome accession: NC_013922
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3718124 - 3718888 bp
Length : 765 bp
Strand : +
Note : KEGG: hwa:HQ3478A ABC transporter ATP-binding protein LolDE; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
ATGATTCATCGCGTACTGGGAACCCTGGCGTCGTCGGCGTCACAGGCTGCGGACGACCACCGGACACCGCCCGCTGTCCG
ACTCGCAGACGTCACACACGAGTACGGGACGGGCGGGAGCCGGTTTCGATCGGGTGACCGGCGAACCGTCACCGCGCTCC
GGAACGTCTCGGTCGACATCCAGCCCGGCGAAATCGTCGGCCTCGAGGGACCGAGCGGCAGCGGCAAGTCGACGATTCTC
CACCTCGTCGCCGGGCTGCTCGTGCCGACCAGCGGCAGCGTCGAACTCCACGGCACGGAGCTCTCTGCGCTCTCGAACCG
AAAGCGAACGCGCGTCCGCCGCCAGCACGTCGGGATCGTCTTCCAGCACTTTCACCTGCTTCCCTCGCTCTCCGCGCGAG
CGAACGTCGCACTGCCGCTCGTCCAGACCGGCGTCTCGAAACGCAAGCGCCGACGACGCGCCACGGAACTGCTAGAGCGA
GTCGGTCTCGGCGACCGAACGACACACCTCCCCAGCGAACTCAGCGGCGGCGAGTGCCAGCGCGTCGCCATCGCCCGCTC
GCTCGCGACCGACCCCGACGTCGTCATCGCCGACGAACCCACCGGCGAACTCGACACCGCGACCGGCGAGACCGTACTCG
AGTTACTGACCGATATTGGGCGCGAGCGGGCGGTCGTCCTCGCCTCGCACGACGAGGCGACGCTCGCGGTTGCAGATCGT
GTGCTCACGCTGCGGGACGGACGGGTGGTTTCGGATGGCGGATAG

Protein sequence : 
MIHRVLGTLASSASQAADDHRTPPAVRLADVTHEYGTGGSRFRSGDRRTVTALRNVSVDIQPGEIVGLEGPSGSGKSTIL
HLVAGLLVPTSGSVELHGTELSALSNRKRTRVRRQHVGIVFQHFHLLPSLSARANVALPLVQTGVSKRKRRRRATELLER
VGLGDRTTHLPSELSGGECQRVAIARSLATDPDVVIADEPTGELDTATGETVLELLTDIGRERAVVLASHDEATLAVADR
VLTLRDGRVVSDGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nmag_3580 YP_003481692.1 ABC transporter NC_012469.1.7686878. Protein 1e-48 46
Nmag_3580 YP_003481692.1 ABC transporter NC_008702.1.4606598. Protein 3e-31 45