Gene Information

Name : Nmag_2187 (Nmag_2187)
Accession : YP_003480316.1
Strain : Natrialba magadii ATCC 43099
Genome accession: NC_013922
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2237398 - 2238192 bp
Length : 795 bp
Strand : +
Note : KEGG: hma:pNG7276 ferrichrome ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
GTGCACTCGAGTCGGTTGGTTGGCGACGACCTCGCGATTGGCTACCCGACGACCGAGGAGCCGGTCGTCGAGGTCGACCG
GATCGATCTTCCAGCGGGCGAGATTACGGCGCTCGTCGGACCGAACGGGAGCGGCAAGTCGACGCTGCTGAAAGCGCTGG
CCCGCCAGCATGCGCCCGAACACGGTACTGTCCTCCTCGACGGGGACGATATCGACGATTTCGATAGCAAGCCCTTCGCT
CGCCGTGTCGGGATGCTTTCCCAGGAGTACGAGTCGGCCGGTGGGATGACTGCCGAGGAGTTGATCTACTACGGACGGTA
TCCGCACATGGGGTTTTTCGATACACCGACCGAGTCCGACGAGGCGGCCGTCGAGCGGGCTATCGACCCCGCGGATGTCG
GCCACCTGCGCGAAGAGGAGGTCGGGAACCTGAGCGGCGGCCAGAAGCAACTCGTCTGGATCGCGATGGTGCTCGCCCAG
GAGACGGATGTGCTTCTGCTCGACGAGCCCACGACGTATCTCGACCTGCAACACCAGCTACAGGTGATGGAACTCGTCCA
GACGCTGAACGACGAACGCGGCGTGACGGTGGGACTCGTTCTCCACAATATCTCGCAGGCAGCACGGTTCGCAGACTATC
TCGTCGCGATACGCGATGGCGAACTGTACGACTGGGGTCCGCCACGAGAAATTGTGAGCGAACAGTTGCTGGCGGACGTC
TTCAACGTTAAAGCGACAGTCGAGCACGATCCCGAGATACGGATTCACCCCGCGCGTGCACTCTCTGATCAATAG

Protein sequence : 
MHSSRLVGDDLAIGYPTTEEPVVEVDRIDLPAGEITALVGPNGSGKSTLLKALARQHAPEHGTVLLDGDDIDDFDSKPFA
RRVGMLSQEYESAGGMTAEELIYYGRYPHMGFFDTPTESDEAAVERAIDPADVGHLREEEVGNLSGGQKQLVWIAMVLAQ
ETDVLLLDEPTTYLDLQHQLQVMELVQTLNDERGVTVGLVLHNISQAARFADYLVAIRDGELYDWGPPREIVSEQLLADV
FNVKATVEHDPEIRIHPARALSDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-42 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-43 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-41 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-43 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-42 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-42 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-42 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nmag_2187 YP_003480316.1 ABC transporter BAC0164 Protein 1e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nmag_2187 YP_003480316.1 ABC transporter VFG0925 Protein 5e-51 45
Nmag_2187 YP_003480316.1 ABC transporter VFG1042 Protein 1e-41 42