|
Name : Nmag_2178 (Nmag_2178) Accession : YP_003480307.1 Strain : Natrialba magadii ATCC 43099 Genome accession: NC_013922 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2227590 - 2228969 bp Length : 1380 bp Strand : - Note : TIGRFAM: seryl-tRNA synthetase; KEGG: hut:Huta_1764 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGATCGATCAAACGACGCTTCGTGAACAGCCCGAGGCCGTTCGCGAGGCACTCGAGAACCGGGGCGCGGACATTGACCT CGACGACCTTCTCGAGACGGACGAGCGCTGGCGCGAACTGAAAGCCCGCGGCGACGAACTCCGCCACGAGCGAAACGAGA TCACGGACACAATCGGCGAACTCGTCGCCGAAGGCAAAGACGAGGAACGCGAGGAAGCCATCGCGGAATCGAAGGAGCTC AAAGCCGAAATCGAGGACGTCGAGGCCGAGGCCGCCGAGCTCCGCGATGAACTCGACGAGCGGCTCCTCGAGATTCCACA GCTTCCCGACGAGAGCGTCCCGGTCGGCGAGGACGAAGACGACAACGTCGAGGACCGCCGCTGGGGCTTCGACGACATGC GTGATCTTCCAGACGACATCGTCCCCCACTACGACCTCGGCGAGGAAATGGACATCATCGACGAGGCTCGTGGCGCGAAA ACCACGGGCTCTGGCTTCTACTTCCTGAAGGGCGACGGCGCACGCTTAGAGCACGCGCTGATCCAGTTCATGCTCGATAT CCACCGTGAGCAAGACTACGTGGACCTCTTCCCGCCGGTGCCGGTTACCAGCGAATCGATGCGCGGTACCGGTCAGCTGC CAAAGTTCGCCGACGACGCCTACCGACTCGGCGGCAGCAACGAGGAAGACTACGAGGACGAGGATCTCTGGCTCTGCCCG ACGGCCGAGGTGCCGGTCACCAACATGTACGCCGACGACATCCTCCTCAAAGACGACCTTCCGCTCAAACACCAGGCATA CACCCCGAACTTCCGGCGCGAAGCCGGCGAGCACGGCACCGAAACCCGCGGCATCGTTCGCGTCCATCAGTTCAACAAGG TCGAACTCGTCAACTTCGTCGAACCCGAGAACAGCTACGACCGCCTCGAGGGACTACTCTCGGAAGCCGAAGAAGTGCTT CAGCAACTCGGCCTCCCCTACCGCATCCTCGAACTCTGTACCGGCGACCTCACCTTCGCCTCGGCCAAGACCTACGACAT CGAAATCTGGGCTCCCGCCGACGACATGGACGACGGGCCCGACGAAGGCGGCCGCTGGCTTGAGGTCTCCTCGGCCTCGA ACTTCGAAGACTTCCAGGCCCGCCGCGCCGGCCTGCGCTACCGCCCAGAGCGACACGAATCGGCCGACTACCTCCACACG CTGAACGCCTCCGGGCTCGCACTACCGCGCGTGATGGTTGCGGTACTCGAGTACTACCAGAACGAGGACGGTACTGTCAC GGTACCCGAGGCGCTGCGGCCGTATATGGGTGGCCAGGAGGTTATCGAGGGCCACGAGAAGGTCGGCGAGTCGGCGCTCG GTGCGGGCGAGCGGGAGTAG Protein sequence : MIDQTTLREQPEAVREALENRGADIDLDDLLETDERWRELKARGDELRHERNEITDTIGELVAEGKDEEREEAIAESKEL KAEIEDVEAEAAELRDELDERLLEIPQLPDESVPVGEDEDDNVEDRRWGFDDMRDLPDDIVPHYDLGEEMDIIDEARGAK TTGSGFYFLKGDGARLEHALIQFMLDIHREQDYVDLFPPVPVTSESMRGTGQLPKFADDAYRLGGSNEEDYEDEDLWLCP TAEVPVTNMYADDILLKDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVNFVEPENSYDRLEGLLSEAEEVL QQLGLPYRILELCTGDLTFASAKTYDIEIWAPADDMDDGPDEGGRWLEVSSASNFEDFQARRAGLRYRPERHESADYLHT LNASGLALPRVMVAVLEYYQNEDGTVTVPEALRPYMGGQEVIEGHEKVGESALGAGERE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-72 | 53 |
