Gene Information

Name : Thit_0599 (Thit_0599)
Accession : YP_003476462.1
Strain : Thermoanaerobacter italicus Ab9
Genome accession: NC_013921
Putative virulence/resistance : Unknown
Product : integrase catalytic protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 651015 - 652058 bp
Length : 1044 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: tpd:Teth39_2044 integrase catalytic subunit

DNA sequence :
ATGGTTCATAATAATGATACCACAAAAAAGCGTTCTTTTAAACACTTAAGTAGCTATGAACGAGGAGAAATCTATGCATT
ACTCAAAGAAGGAAGAAGTATTCGGTATATTGCTAAAAAACTTAATCGATCTCCAAGCACTATAAGCCGTGAAATTAAAC
GTGGAACTACTACACAACTTAGAAGTGATTTATCTTCTTATACAAGCTATTTTCCTGAAACCGGTCAAGCTATCTACGAA
AAAAATCGCTCAAATTGCGGAGCTAAATTTAAAGTAGCTAAAGCAGAAGATTTTTTGAAATATGCTGAAAATAAAATATT
AAATGAAAAATGGTCACCAGATGCAGTTGTAGGCTATTGTAAAAAAGACCCAAGCTGGAATAATAAAACTATTGTTTGTA
CTAAAACACTGTACAACTATATAGATAGAGGATTATTAAAAGTTAAAAACATTGATTTACCTTTAAAATTACGTTTAAAA
CCAAGAAAGAAACAAAATCGTAAAAATAAACGTATTATGGGTAAAAGTATTGATTTTAGGCCTAAAGAAGTTGAAAGCCG
TGAAGTTTTTGGGCATTGGGAAATAGATACGTTAATTGGCAAGAAATCTAATGACAAGGTCCTTTTAACATTAATAGAGC
GTAAGACTCGCCATGAAATAATATTCTTATTAGATGCAAAAGACAATAAATCTGTTAAAGATGCATTATCAAAATTAAAA
GATATGTTTGGTGACAATTTAAGCAAGGTCTTTAAAACAATAACATCTGATAATGGTACAGAGTTTAGTGATTTAGAAAG
TGCTCTTTTAGAATATGGCGTAGAAGTATATTATACACATCCATATTCATCTTGGGAAAGAGCTACAAATGAACGACATA
ACGGTCTTATACGACGTTTCATCCCTAAAGGTAAAAGTATTAAAGATTTATCTATAGATACGATAAAGAGAGTAGAAAAC
TGGCTTAATAACCTTCCACGAAAATTGTTAAATTACAAAACGCCTAAGGAATACTTTTATGAAGAGCTGGCAAAAATCTG
TTAA

Protein sequence :
MVHNNDTTKKRSFKHLSSYERGEIYALLKEGRSIRYIAKKLNRSPSTISREIKRGTTTQLRSDLSSYTSYFPETGQAIYE
KNRSNCGAKFKVAKAEDFLKYAENKILNEKWSPDAVVGYCKKDPSWNNKTIVCTKTLYNYIDRGLLKVKNIDLPLKLRLK
PRKKQNRKNKRIMGKSIDFRPKEVESREVFGHWEIDTLIGKKSNDKVLLTLIERKTRHEIIFLLDAKDNKSVKDALSKLK
DMFGDNLSKVFKTITSDNGTEFSDLESALLEYGVEVYYTHPYSSWERATNERHNGLIRRFIPKGKSIKDLSIDTIKRVEN
WLNNLPRKLLNYKTPKEYFYEELAKIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 7e-68 52
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 6e-68 52
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 4e-68 52
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 2e-68 52
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 2e-67 52
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 2e-67 51
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 1e-67 51
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 1e-67 51
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 2e-67 51
CPR_0659 YP_697986.1 IS1470, transposase Not tested Not named Protein 1e-42 47