Gene Information

Name : Thit_0520 (Thit_0520)
Accession : YP_003476384.1
Strain : Thermoanaerobacter italicus Ab9
Genome accession: NC_013921
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 564943 - 567081 bp
Length : 2139 bp
Strand : +
Note : KEGG: tpd:Teth39_1753 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold

DNA sequence :
ATGGATAGAATAAAAGAGGCATTAAAAAGAGAATTTGGTTTGAAAGATTTTCAGGTGGAAAACACTATAAAACTTATTGA
TGAAGGGAATACAATTCCTTTTATTGCAAGGTACAGAAAAGAAGCGACAGGAAGTTTGTCAGATGAGGTGTTGAGAAATT
TTTATGAGCGCCTCACATATTTGAGAAACCTTGAAGAGAAAAAACAGGATACAATAAGGCTTATTGATGAGCAGGGAAAA
TTGACAGAGGAGATAAAAGAAAAAATAGATAATGCTACAACTTTACAAGAGGTAGAGGACATATACAGACCTTTTAGGCC
AAAAAGAAGGACAAGGGCGACCATTGCGAAAGAAAAAGGCTTGGAGCCTCTTGCAAAGATTATTTCTTCAAATGAAGTAA
TAGATGGGGATGTAAAGGAATACGCAAAGCCTTATCTTAATGAAAATGTTCTAACAGTTGAAGAAGCATACCAAGGAGCA
ATGGATATAATTGCAGAGGATATATCTGATGACGCTGAGATAAGAAAATACATAAGGAATTTTACATGGAATAACGGAAT
TATAGTGACACAAGCGCTGAAAAAAGAAAAATCTCCCTATGAGATGTATTATGACTATAAAGAAGCGGTAAAGACAATAC
CGCCTCATAGGATTCTTGCGATAAACAGGGCAGAAAGGGAAAAATACATATCTGTAAAAATTGAGGTAGATAGTGAAAGG
ATAATAAATAGGCTTATAGAATCAAAAGTAAATAAAGCTTCAATATTTGCAGAGTATTATAAGAGGGCAATTGAAGATTC
CTACAAAAGGCTTATTGCACCTTCAATAGAGAGAGAAATAAGGAATGCTCTCACAGAAAAAGCAGAAGAAAAAGCGATAA
TAGTCTTTAAAGAAAATCTAAAAAGCCTTTTACTTCAACCCCCAATAAAAGGACATGTTGTTATGGGGTTTGACCCGGCG
TATAGAACAGGGTGTAAGATTGCCATTGTGGATGAAACAGGAAAACTTTTAGATACTGCAACAATCTATCCTACCCCTCC
TCAAAATGATATTGATAATTCTAAAAAAGTGCTCAAAGAGCTAATAGAAAAATACAATGTCACTTTAATCGCTTTGGGGA
ATGGAACTGCCTCAAGAGAAAGCGAAATGTTTATAGCAGACCTTATAAAGGAGCTTTCAAGAGAGGTAAAGTATGTGATA
GTGAATGAAGCAGGTGCATCGGTTTATTCTGCTTCTCCAATAGGTACAGAAGAATTTCCTGACATAAACGTAAGCTTAAG
AGGTGCTATATCACTGGCAAGGAGGCTTCAAGATCCCTTAGCAGAGCTTGTAAAAATCGATCCAAAGTCTATCGGGGTAG
GACAGTATCAGCACGATGTAGACCAGAAAAAACTGGGAGAAGCTTTAAACGGTGTTGTAGAAGATTGTGTAAACAGCGTA
GGAGTTGATTTAAACACTGCGTCAGTATCTCTTTTAAAATACGTTTCAGGGATAAATACTGTTATTGCCAAGAATATTGT
AGAATATAGAAATCAAATAGGGAAATTTACAAGTAGGGAACAGCTTAAAAATGTAAAGAGATTAGGAGAAGCCACTTTTA
CACAATGTGCTGGTTTTTTGAGGATTTTGGAGGGAGACAATATTTTTGATTCAACAGCAGTTCATCCAGAGCGTTACGAA
ACTTTGGAAAAACTTTTGAAAAAATTTGGATATAAAAAAGAAAAATTAGATAGAAAAAAGTTAAAAGACTTTGCTAATTC
TTTAGAAGAATACGGATTAGAGAGGATTTCAGAGGAATACGATATAGGACTTCCTACACTTTACGACATAGTTTCAGAGC
TTAAAAAACCTGGAAGAGACCCAAGAGAAGACTTACCCAAGCCCGTTTTAAGGTCTGATGTAATGACTATAAATGAGCTG
AAACCAGGGATGGAGCTAATGGGAACAGTTAGGAATGTTACTGATTTTGGCTGTTTTGTAGATATAGGGGTTCATACTGA
TGGCCTTGTCCACATTTCTGAGATGTCTCAAAGCTACATAAAACATCCTCTTGATGTAGTTGCAGTGGGTGACATTGTAA
AAGTGAAAGTTTTAAGTGTTGACCTTGAGAGAAATCGAATTTCTCTTTCAATGAAATAA

Protein sequence :
MDRIKEALKREFGLKDFQVENTIKLIDEGNTIPFIARYRKEATGSLSDEVLRNFYERLTYLRNLEEKKQDTIRLIDEQGK
LTEEIKEKIDNATTLQEVEDIYRPFRPKRRTRATIAKEKGLEPLAKIISSNEVIDGDVKEYAKPYLNENVLTVEEAYQGA
MDIIAEDISDDAEIRKYIRNFTWNNGIIVTQALKKEKSPYEMYYDYKEAVKTIPPHRILAINRAEREKYISVKIEVDSER
IINRLIESKVNKASIFAEYYKRAIEDSYKRLIAPSIEREIRNALTEKAEEKAIIVFKENLKSLLLQPPIKGHVVMGFDPA
YRTGCKIAIVDETGKLLDTATIYPTPPQNDIDNSKKVLKELIEKYNVTLIALGNGTASRESEMFIADLIKELSREVKYVI
VNEAGASVYSASPIGTEEFPDINVSLRGAISLARRLQDPLAELVKIDPKSIGVGQYQHDVDQKKLGEALNGVVEDCVNSV
GVDLNTASVSLLKYVSGINTVIAKNIVEYRNQIGKFTSREQLKNVKRLGEATFTQCAGFLRILEGDNIFDSTAVHPERYE
TLEKLLKKFGYKKEKLDRKKLKDFANSLEEYGLERISEEYDIGLPTLYDIVSELKKPGRDPREDLPKPVLRSDVMTINEL
KPGMELMGTVRNVTDFGCFVDIGVHTDGLVHISEMSQSYIKHPLDVVAVGDIVKVKVLSVDLERNRISLSMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 2e-132 45