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Name : Thit_0423 (Thit_0423) Accession : YP_003476292.1 Strain : Thermoanaerobacter italicus Ab9 Genome accession: NC_013921 Putative virulence/resistance : Unknown Product : alpha amylase catalytic subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 466383 - 468053 bp Length : 1671 bp Strand : - Note : KEGG: csc:Csac_2428 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain DNA sequence : ATGCAAAGAAAATGGTGGAAAGAGGCAGTTGTATATCAAATATATCCTCGCAGTTTTTATGATACAAATGGTGATGGAAT TGGAGATTTACAAGGCATAATAACTAAACTTGACTATTTAAAAGAACTTGGAATAGATGTCATTTGGCTAAACCCAATTT ACCAATCGCCAAATGCAGATAACGGTTATGATATTAGTGACTATTATGATATTATGGACGAGTTTGGAACAATGTCAGAT TTTGATGAGCTTTTAAGCCAAGCACACAAACGAGGTATAAAGATTGTAATGGATTTGGTTGTAAACCATACATCAGATGA GCATAAGTGGTTTTTAGAATCAAGAAAATCAAAGGATAATCCATATAGAGAGTTTTATTTTTGGAAAAAAGGCAAAAATG GCCGTCCACCTAACAACTGGACATCATTTTTCAGTGGCTCTGCCTGGGAATATGACCCACTAACCAATGAATATTACCTA CATCTTTTTGCTGTCAAACAACCAGATCTAAACTGGGATAACCCTAAGGTCAGACAAGAGATATACAAAATGATGAAATG GTGGCTAGACAAAGGTATTGATGGGTTTAGAATGGATGTTATAAATCTAATCTCAAAAGTGGAAGGATTACCAGATGATA TAGAAGGCGAAAGGCAGGGTGGCCTTGTTGGCACAAAATATTATGCAAACGGTCCCAAGGTTCATCAATATTTGCAAGAA ATGAACAAAGAAGTTTTAAGCAAGTATGACATCATGACCGTTGGTGAAACACCATTTGTAACCCCTGAAATTGCAAAATT ATATGTGGAATATGACAGAAATGAATTAAACATGTTATTTCACTTTGAACTCATGGACATTGACTGCGGTAATAGCAAAT GGGATATAAAACCATGGAAGCTTACAGATTTCAAGAAAATCATGTACAAATGGTACTTAGCATTAAAAGATAAAGGCTGG AATTCGCTATACTTGAACAATCATGATCAACCAAGAATGGTCTCACGTTTCGGAAATGATAAAGAATACAGAGTAGAATC AGCAAAACTGTTGGCAACATTTCTTCATACATGGCAAGGAACGCCGTATATCTATCAAGGTGAAGAGATTGGTATGACGA ATTGCAAGTTTGAAAGCATTGATGAATTTAGAGATATAGAAACCCTGAATTGGTATAACGATATGAAAAAGCAAGGAAAA AGCGATGAGAAACTTTTAGATATTTTGAACAAGCGCAGTCGAGACCATGCGAGAACACCAATGCAATGGGATGATACTAA AAACGCAGGTTTTACCACAGGTATACCATGGATTAAGGTAAATCCTAATTATAAAGAAATAAATGTAAAAAAAGCATTAG AGGATAAAAATTCTATATTTTATTATTACAAGAAGCTAATTGAGCTTAGGAAAAAATACCCTGTTATTGTATACGGCGAT ATCACTATGCTATATGAGGATGATGAAAAAATCTTTTCATATACAAGAAGTTACGGCAATCAAAGGCTTTTGGTTGTGCT GAACTTTTCAGAAGATAATGTTAATTTTGCTGTACCAAAGGAGATGTTCACTAACTCCCCTCAGCTTTTAATAAGCAACT ATCCAGTTAATGATAATATTCAAGAAAAAGTTATTTTAAGACCATATGAAGCAAGGGTATATAAAATATGA Protein sequence : MQRKWWKEAVVYQIYPRSFYDTNGDGIGDLQGIITKLDYLKELGIDVIWLNPIYQSPNADNGYDISDYYDIMDEFGTMSD FDELLSQAHKRGIKIVMDLVVNHTSDEHKWFLESRKSKDNPYREFYFWKKGKNGRPPNNWTSFFSGSAWEYDPLTNEYYL HLFAVKQPDLNWDNPKVRQEIYKMMKWWLDKGIDGFRMDVINLISKVEGLPDDIEGERQGGLVGTKYYANGPKVHQYLQE MNKEVLSKYDIMTVGETPFVTPEIAKLYVEYDRNELNMLFHFELMDIDCGNSKWDIKPWKLTDFKKIMYKWYLALKDKGW NSLYLNNHDQPRMVSRFGNDKEYRVESAKLLATFLHTWQGTPYIYQGEEIGMTNCKFESIDEFRDIETLNWYNDMKKQGK SDEKLLDILNKRSRDHARTPMQWDDTKNAGFTTGIPWIKVNPNYKEINVKKALEDKNSIFYYYKKLIELRKKYPVIVYGD ITMLYEDDEKIFSYTRSYGNQRLLVVLNFSEDNVNFAVPKEMFTNSPQLLISNYPVNDNIQEKVILRPYEARVYKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-150 | 58 |
