Gene Information

Name : Thit_0409 (Thit_0409)
Accession : YP_003476278.1
Strain : Thermoanaerobacter italicus Ab9
Genome accession: NC_013921
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 448786 - 449454 bp
Length : 669 bp
Strand : +
Note : KEGG: cbf:CLI_0667 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
ATGGTTATTTTAAAGACAGAAAAATTATTTAAAGAATACAATGTGGAAGGAAATGTGACAAAAGTTCTTAATGGTATTGA
TTTAGAAATCAATGAAGGAGAGTTTGTTTCTATTATGGGACCGTCTGGCTCAGGGAAAAGTACTTTGTTGTATGTACTTA
GTGGTTTAGAAAAACCTACTTCTGGTAGTATCTTTTTTAAGGGAGAAGATTTAACTTTGTTAAATGATGATAAATTGAGT
AAATTGAGAAGAAGAGAATTTGGTTTTATATTTCAGTTTTATAATTTGATACCTAATTTAAACGTTGAAGAAAACATAAC
ACTCCCCTTAGAGTTTGAAGGAATAAATAGGAAAGAATATAATAGCAATATTGATAAAATTTTAGAAAGGGTCGGATTAA
TTGAAAAAAAGCAGAATTTTCCTTATCAATTATCGGGAGGACAGCAACAACGAGTGGCCATTGCAAGAGCGCTGATAATT
GATCCTAAAATAATATTTGCGGATGAGCCAACTGGGAATCTTGATTCAAAAGCGGGAGAAGAAATTTTAAAGCTTCTGTA
TAATTTGAGTAAAGAAAATAATAAAACAGTATTAATGGTTACTCATGATAATTATGCTGCATCCTTCAGCGATAGGATAA
TTAAAATAAAAGATGGGGTAATTGAGTGA

Protein sequence : 
MVILKTEKLFKEYNVEGNVTKVLNGIDLEINEGEFVSIMGPSGSGKSTLLYVLSGLEKPTSGSIFFKGEDLTLLNDDKLS
KLRRREFGFIFQFYNLIPNLNVEENITLPLEFEGINRKEYNSNIDKILERVGLIEKKQNFPYQLSGGQQQRVAIARALII
DPKIIFADEPTGNLDSKAGEEILKLLYNLSKENNKTVLMVTHDNYAASFSDRIIKIKDGVIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-40 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-29 41
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thit_0409 YP_003476278.1 ABC transporter CP001581.1.gene598.p Protein 2e-47 53
Thit_0409 YP_003476278.1 ABC transporter NC_012469.1.7686878. Protein 9e-49 46
Thit_0409 YP_003476278.1 ABC transporter CP001581.1.gene798.p Protein 6e-43 44
Thit_0409 YP_003476278.1 ABC transporter NC_008702.1.4606598. Protein 3e-36 41