|
Name : Thit_0028 (Thit_0028) Accession : YP_003475919.1 Strain : Thermoanaerobacter italicus Ab9 Genome accession: NC_013921 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 30226 - 31497 bp Length : 1272 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; KEGG: tpd:Teth39_0029 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGATAGATGTAAAAAGAATAAGAAGCAATCCTGAAGCTATTAAGAGGGCTATTGAGCTTAAAAAAGACAAGGCGGATAT AGATAAATTTTTAAAACTAGATGAAAGAAGAAGACAGATGTTAGTAGAATTAGAAGCATTAAAAAATAGGCGAAATGTAG AATCAGATAATATTGCAAAACTTAAAAGAGAAGGAAAAGATGTCAGCGACTTGATAGCTGAAATGAAAGAATTGTCCAGC AAAATAAAAGAAATGGAGCAAGAAGTAAAAGAGGTAGAAGAACAATTAGAGGGAATTTTGTGGACAATCCCTAATATACC TCATGAAAGCGTGCCAACAGGTGATAGCGATGAAGATAATGTTGAAGTAAGAAGATGGGGTGAAACGAGAAAATTTGACT TTGAACCAAAACCTCATTGGGAAATAGGAGAAGAACTGGATATTTTAGACTTTGAAGCTGCGGCGAGAGTAACAGGCTCC AGGTTCACTTTTTACAAAGGTCTTGGGGCTCGTTTAGAAAGGGCACTTATAAACTTCATGCTGGACTTACACGTTGAAAA ACATGGGTATACTGAGGTGTTTCCTCCATTTATGGTACATAGAAGGAGTATGCTTGGCACAGGACAACTTCCTAAATTTG AAGAAGATGCTTTCAAGGTTTACGGTACTGATTATTTTTTGATACCCACAGCAGAAGTGCCTGTAACCAATATGTACCGA GATACAATAATAGATGGTGACAAGCTTCCAATATATCATTGTGCTTATAGCGCATGTTTCAGACAAGAAGCAGGTTCTGC GGGAAGAGATACAAGAGGACTTATAAGGCAGCACCAATTCAACAAAGTTGAACTTGTCAAATTTACAGAACCAGACAAAT CCTATGAAGAATTAGAAAAAATGACTAAAGACGCAGAAGAGGTTTTACAACTGTTGGGACTTCCTTATAGAGTAGTGGCC ATATGCACAGGTGATTTAGGTTTTACTGCTTCAAAAAAATATGACATAGAAGTGTGGATGCCAAGCTATGGAAGATATGT AGAAGTTTCCTCTTGTAGCAATTGTGAAGATTTTCAAGCTAGAAGAGCTAATATAAAGTACAGACCTAAGGATGGAGGCA AAGCACAATATGTTCACACCTTAAATGGGTCTGGCGTCGCTGTAGGAAGGACCTTTGCTGCAATATTAGAAAATTATCAG CAAGAAGATGGCTCAGTTGTCATACCAGAAGTTTTAAGACCCTATATGAAAGTGGATGTAATAAAGAAATAA Protein sequence : MIDVKRIRSNPEAIKRAIELKKDKADIDKFLKLDERRRQMLVELEALKNRRNVESDNIAKLKREGKDVSDLIAEMKELSS KIKEMEQEVKEVEEQLEGILWTIPNIPHESVPTGDSDEDNVEVRRWGETRKFDFEPKPHWEIGEELDILDFEAAARVTGS RFTFYKGLGARLERALINFMLDLHVEKHGYTEVFPPFMVHRRSMLGTGQLPKFEEDAFKVYGTDYFLIPTAEVPVTNMYR DTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELEKMTKDAEEVLQLLGLPYRVVA ICTGDLGFTASKKYDIEVWMPSYGRYVEVSSCSNCEDFQARRANIKYRPKDGGKAQYVHTLNGSGVAVGRTFAAILENYQ QEDGSVVIPEVLRPYMKVDVIKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-117 | 60 |
