Gene Information

Name : Thit_2350 (Thit_2350)
Accession : YP_003478113.1
Strain : Thermoanaerobacter italicus Ab9
Genome accession: NC_013921
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2399668 - 2400345 bp
Length : 678 bp
Strand : -
Note : KEGG: tex:Teth514_2375 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence : 
ATGCTTATAAAAATAGAAAATGTAAAAAAAGAATACATAAGTGGAAAGAAAAAGAATCTGGTTTTAAAGGGAGTAAACTT
AGAAATAAATGAGGGAGAAAAGATTGCTATAGTAGGACCTTCAGGCTCTGGCAAAACAACACTTCTTAATATAATAGGAT
TATTACTTCCCGCAACAGAAGGGGAGGTTTACTTAGCTGGGAAAAGAGCATCAAGTTTAAAGGAAAAAGAAAGGGCTAAA
CTAAGAAATAAATTTTTTGGGTATGTATTCCAGGAATTTCTCTTAGTAGAAGAAGATACAGTATTTCAAAATATAGAAAT
ACCTCTTTTGTACTCTTTGACAAAGAAGACAAAATCAGAGAAAAGAAAAATGGTTGAAGAAGTTTTGGAAAAAGTGGGTT
TGGAAGTTAAAATAAACGATAAGGTCAGGAACTTATCAGGAGGAGAAAGGCAAAGGGTAGCAATAGCAAGAGCTATAATA
AATAATCCTGAGGTAATACTTGCAGATGAACCGACAGGTTCGTTGGATACAGAAAACGGTGAAAAAATCGTCGGCATTTT
GGAAAGTTTAGTAGACAAGGGTAAGACTTTAGTGATTGTAACACATAATGAAGCTATTGCAAAAAGATGTGACAGGATAC
TCAGAATAAGGGATGGATATGTGGAGATAAAAGAGTAA

Protein sequence : 
MLIKIENVKKEYISGKKKNLVLKGVNLEINEGEKIAIVGPSGSGKTTLLNIIGLLLPATEGEVYLAGKRASSLKEKERAK
LRNKFFGYVFQEFLLVEEDTVFQNIEIPLLYSLTKKTKSEKRKMVEEVLEKVGLEVKINDKVRNLSGGERQRVAIARAII
NNPEVILADEPTGSLDTENGEKIVGILESLVDKGKTLVIVTHNEAIAKRCDRILRIRDGYVEIKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 8e-27 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thit_2350 YP_003478113.1 ABC transporter NC_012469.1.7686878. Protein 8e-36 50
Thit_2350 YP_003478113.1 ABC transporter NC_008702.1.4606598. Protein 1e-25 45
Thit_2350 YP_003478113.1 ABC transporter NC_012469.1.7686946. Protein 3e-23 42
Thit_2350 YP_003478113.1 ABC transporter CP001581.1.gene798.p Protein 1e-24 41
Thit_2350 YP_003478113.1 ABC transporter CP001581.1.gene598.p Protein 4e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thit_2350 YP_003478113.1 ABC transporter VFG0869 Protein 2e-20 42