Gene Information

Name : Thit_2014 (Thit_2014)
Accession : YP_003477810.1
Strain : Thermoanaerobacter italicus Ab9
Genome accession: NC_013921
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2056949 - 2059399 bp
Length : 2451 bp
Strand : -
Note : KEGG: tpd:Teth39_0342 ATPase; PFAM: ATPase AAA-2 domain protein; ATPase AAA; UvrB/UvrC protein; Clp domain protein; Clp ATPase-like; SMART: ATPase AAA

DNA sequence :
ATGGCGATGTTTGGAAGATTTACAGAAAGAGCTCAAAAAGCTCTTTATTTGGCACAGGAGGAAGCGAGGTCTTTTTATCA
TAATTATGTAGGGACAGAGCATATTTTATTGGGATTATTAAAAGAAAATGAAGGTATAGCAGCAAGAACTTTAAAAAAAT
TAGGAGTAACTTATGAAACTACAAGAGAAAAAGTACTATCTTTGATTGGAATGGGAAATATCCCGGGTGACGTGGTAGGA
TATACACCACGGGCTAAAAGGGTATTGGAATTGAGTCTTAGTGAGGCAAGAAGATTTAATACCAGCTATATTGGAACCGA
GCACATTTTATTAGGGATTTTAAGAGAGGGTGAAGGAGTCGCTGTACGAATTTTAATGGAACAAGGTATAGATTTCAATA
GAGTGAGAGAGGAGATTGTAAAGATGCTTAACGAAGAGCCTTCAGGAGGACCTGCAAAGGCTACAAAGGTTAAAAATACA
AATACCCCTACTCTAAATCAATTTGGAAGAGATTTGACCGAACTTGCAAGAGATGGTAAACTTGACCCTGTAATAGGAAG
AGAAAAAGAGATTGAAAGAGTTATACAGATTCTGAGCAGGAGGACAAAAAATAATCCTGTCCTAATAGGTGAACCGGGTG
TTGGTAAAACCGCTATTGTAGAAGGGCTTGCTCAAAAGATTGTAGAAGGTGAAATTCCTGAAATTTTGAAAGATAAAAGA
GTTGTAACTTTAGACATGGCTTCTATGGTAGCAGGTACAAAGTACAGAGGCGAATTTGAAGATAGGTTAAAAACAGTATT
AAATGAGGTTATAAAGGCAGGAAATGTTATACTATTTATAGATGAGATGCACACTTTAATTGGAGCAGGTGCAGCGGAAG
GTGCAATAGATGCATCAAACATTTTAAAACCGGCACTTGCAAGAGGTGAAATTCAAGTAGTTGGAGCAACTACCTTGGAG
GAATACAGAAAATATGTAGAAAGAGACCCTGCATTAGAGAGAAGGTTCCAACCAATAATTGTAGATGAACCAACTGTGGA
AGAGACTATTGAAATATTAAAAGGATTAAGAGATAAATATGAAGCTCATCATAGGGTTAAAATTACTGATGAAGCTTTAG
AGGCAGCGGCTAGACTTTCCCACAGATATATTGCAGATAGATTTTTACCTGACAAAGCTATTGACTTAATAGATGAAGCT
GCTTCTCGCGTAAGGTTGAAGACAGTGACTGCCCCTCCAGAGATAAAAGAACTGGAAGATAAAATCAATGACCTTATAAA
AGAAAAGGAAGAAGCGATAAAGACTCAAGAGTACGAAAAAGCTGCAAAAATAAGAGATGAAGAACAAAAATTAAGAGAAG
AATTGGAAAAATTAAAAGCCAAATGGCAACAAAATTCTCTTTCTAATGAAAAAAGTGTGGGACCAGAAGAAATTGCACAA
GTTGTATCTCTGTGGACAGGAATACCTGTAAAAAAATTGGCTGAAGAAGAATCAGAAAGGCTGTTACATTTAGAAGAGAT
ATTGCATGAAAGAGTCATAGGGCAAAATGAAGCTGTAGAAGCAGTAGCAAGGGCTATAAGAAGGGCAAGAGTGGGCTTAA
AAGATCCAAAAAGACCAATAGGTTCGTTTATCTTCTTGGGTCCTACTGGAGTTGGTAAAACAGAACTTACAAAGGCTTTG
GCAGAAGCACTTTTTGGCGATGAAAATGCTATGATTAGGCTTGATATGTCAGAATATATGGAAAGGCATACCGTCTCAAA
ACTTATTGGTTCACCTCCAGGATATGTAGGATTTGAAGAAGGTGGACAATTAACAGAAAAAGTAAGAAGAAAGCCCTATT
CAGTAATCTTGCTGGATGAAATTGAAAAGGCCCATCCTGACGTGTTTAATATTCTCCTTCAAATATTAGAGGATGGAAGA
CTCACTGATTCAAAAGGTAGGACTGTAGACTTCAAAAATACCGTTATAATCATGACATCAAACGTAGGAGCAGAATTGCT
TAAAAAACAAGCTACTTTAGGATTTATGCCCCAAGAAAAAGAAGATAAGGCTTCTCATGAGAAGGTAAAAGAGACATTAA
TGGCAGAATTAAGAAAGACCTTTAGACCTGAATTCTTAAATAGGGTGGATGAAATAATTGTATTCCATCAGTTGACAAAA
GAAGACATTGAAAAGATTGCTGATATAATGATGAAAGAATTGAATGATAGATTAAAAGAGAACAATATTAAACTGGAGTT
TACCCCTGAAGGCAAAGAGGAAATTATTAAACAAGGATATGACCCTAACTACGGTGCAAGGCCTTTAAGAAGAGTTATAC
AAAGGATTGTAGAGAATCAATTGTCTGAACTTATGTTGCAGGGGAAAGTAAAACCTGGAGATGAGCTTATAGTGACTGCA
AAAGACGGAAAAATAGAGTTTGTGAAAAAAGATGCGGTTCAAAAGACTTAG

Protein sequence :
MAMFGRFTERAQKALYLAQEEARSFYHNYVGTEHILLGLLKENEGIAARTLKKLGVTYETTREKVLSLIGMGNIPGDVVG
YTPRAKRVLELSLSEARRFNTSYIGTEHILLGILREGEGVAVRILMEQGIDFNRVREEIVKMLNEEPSGGPAKATKVKNT
NTPTLNQFGRDLTELARDGKLDPVIGREKEIERVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEIPEILKDKR
VVTLDMASMVAGTKYRGEFEDRLKTVLNEVIKAGNVILFIDEMHTLIGAGAAEGAIDASNILKPALARGEIQVVGATTLE
EYRKYVERDPALERRFQPIIVDEPTVEETIEILKGLRDKYEAHHRVKITDEALEAAARLSHRYIADRFLPDKAIDLIDEA
ASRVRLKTVTAPPEIKELEDKINDLIKEKEEAIKTQEYEKAAKIRDEEQKLREELEKLKAKWQQNSLSNEKSVGPEEIAQ
VVSLWTGIPVKKLAEEESERLLHLEEILHERVIGQNEAVEAVARAIRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKAL
AEALFGDENAMIRLDMSEYMERHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQILEDGR
LTDSKGRTVDFKNTVIIMTSNVGAELLKKQATLGFMPQEKEDKASHEKVKETLMAELRKTFRPEFLNRVDEIIVFHQLTK
EDIEKIADIMMKELNDRLKENNIKLEFTPEGKEEIIKQGYDPNYGARPLRRVIQRIVENQLSELMLQGKVKPGDELIVTA
KDGKIEFVKKDAVQKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 57
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-95 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thit_2014 YP_003477810.1 ATPase AAA VFG0079 Protein 0.0 63
Thit_2014 YP_003477810.1 ATPase AAA VFG0080 Protein 2e-149 54