Gene Information

Name : Thit_1412 (Thit_1412)
Accession : YP_003477232.1
Strain : Thermoanaerobacter italicus Ab9
Genome accession: NC_013921
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1433095 - 1433325 bp
Length : 231 bp
Strand : -
Note : KEGG: sah:SaurJH1_0195 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein

DNA sequence :
ATGAAAAACAAACTAAAAGAAATAAGGAAGTCTTTAAATATGACAGGTGTTGAGTTAGCAAAAAAAGTGGGGGTATCGCA
CTCTCTTATATACATGATTGAAGGTGGTTATCGAAATCCTAGTATGAAATTAGCAAAAAAAATAGCAAAAACACTTGGGA
AAAGTTTAGATGAAATTTTTTTTGATGACATATGTCACGAAACGTTACTAAAATCTAATGAAACTGCATGA

Protein sequence :
MKNKLKEIRKSLNMTGVELAKKVGVSHSLIYMIEGGYRNPSMKLAKKIAKTLGKSLDEIFFDDICHETLLKSNETA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 0.56 44
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 0.39 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thit_1412 YP_003477232.1 XRE family transcriptional regulator VFG2168 Protein 0.16 44
Thit_1412 YP_003477232.1 XRE family transcriptional regulator VFG2175 Protein 0.16 44