Gene Information

Name : Thit_1219 (Thit_1219)
Accession : YP_003477045.1
Strain : Thermoanaerobacter italicus Ab9
Genome accession: NC_013921
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1251716 - 1252381 bp
Length : 666 bp
Strand : -
Note : KEGG: tex:Teth514_1677 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence :
ATGAATTTAGGAGATTTAGCTTCATCGGTGACAGCTCCTTCAAATATGGCTACTAGCCTGCAAATAGTTCTGTTATTAAC
AGTGTTGACATTAGCTCCATCTATTTTAATAATGATGACTTCTTTTACTCGGATAGTGATTGTATTATCTTTTTTAAGAA
ATGCACTAGGCCTTCAGCAAATGCCTCCTAATCAAGTACTAATTGGTTTGGCTTTGTTTCTCACTTTATTCATAATGGCA
CCAATTGGGCAAGATATCAACAATAATGCCATAAAACCTTATACAGAAGGGAAGATAACTCAAGAAGAAGCATATCAAAA
TGCTATCAAACCATTGAAAAGTTTCATGTTAAAGCAAACAAGGCAAAATGATTTAAATCTTTTCGTAAGTTTAGCTAAAA
TTAATGTGAGTAATGTGGAAGATTTACCTATGAGGGTAGTCATTCCTGCTTTTATTATAAGTGAACTAAAGACTGCTTTT
GAAATAGGTTTTATAATATACATTCCCTTTTTAATAATTGATATAATAGTTGCCAGTGTTTTAATGTCAATGGGTATGTT
TATGTTGCCACCTGTTTTGATATCTCTTCCTTTTAAAGTGTTACTTTTTATTTTGGTGGATGGCTGGAATCTTGTTGTAA
AATCTTTGATTTTAGGCTTTAGATAG

Protein sequence :
MNLGDLASSVTAPSNMATSLQIVLLLTVLTLAPSILIMMTSFTRIVIVLSFLRNALGLQQMPPNQVLIGLALFLTLFIMA
PIGQDINNNAIKPYTEGKITQEEAYQNAIKPLKSFMLKQTRQNDLNLFVSLAKINVSNVEDLPMRVVIPAFIISELKTAF
EIGFIIYIPFLIIDIIVASVLMSMGMFMLPPVLISLPFKVLLFILVDGWNLVVKSLILGFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-24 42
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-24 42
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 2e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thit_1219 YP_003477045.1 flagellar biosynthetic protein FliP VFG2494 Protein 1e-44 57
Thit_1219 YP_003477045.1 flagellar biosynthetic protein FliP VFG2338 Protein 1e-42 56
Thit_1219 YP_003477045.1 flagellar biosynthetic protein FliP VFG2016 Protein 3e-44 54
Thit_1219 YP_003477045.1 flagellar biosynthetic protein FliP VFG1259 Protein 6e-47 54