Gene Information

Name : Thit_1025 (Thit_1025)
Accession : YP_003476857.1
Strain : Thermoanaerobacter italicus Ab9
Genome accession: NC_013921
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1079445 - 1080137 bp
Length : 693 bp
Strand : -
Note : KEGG: tpd:Teth39_1032 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence : 
ATGATTGAATTGAGCAATGTAAGAAAGGTGTACAATCTTGGAAAAGTCCAAGTGAATGCATTAAAAGGCGCCTCTTTAAA
AATAAATAAAGGTGAATATGTAGCAATTGTTGGTCCCTCTGGCTCTGGTAAATCTACTTTAATGAATATAATTGGTCTTT
TGGATAAACCCACATCTGGAAGTTATAAGCTCAATGGAACCGAAATATCAACGTTAAATGATGACCAATTAGCTTATTTA
AGAAATCGCCAGATAGGTTTTGTTTTTCAGTCTTTTAACCTTTTGAGTAAATTAGACGCACTGTCAAATGTAGAACTGCC
AATGTTGTACGCCAAAATACCAGCAAAAGAGCGTAGAAAAAGAGCAATAAAAGCTTTAGAAATAGTGGGATTAAGTGAAA
GAATACACCACAAACCTAATGAACTCTCAGGGGGGCAGCAACAAAGAGTAGCAATCGCTCGTGCAATTGTAATGAATCCT
TCTTTTCTATTAGCTGACGAGCCAACAGGAAATCTCGACACAAACTCCAGTATTGAGATAATGAAAATTTTTTATCAACT
CAATGAATCGGGTACTACAATAGTGATGGTTACCCACGAACAGGACATAGCAAATCACGCAAAAAGGATACTTCGCTTAA
GAGATGGAAACATTATAGAAGATACCCCTATCGCAAACAGAATAACTTATTAG

Protein sequence : 
MIELSNVRKVYNLGKVQVNALKGASLKINKGEYVAIVGPSGSGKSTLMNIIGLLDKPTSGSYKLNGTEISTLNDDQLAYL
RNRQIGFVFQSFNLLSKLDALSNVELPMLYAKIPAKERRKRAIKALEIVGLSERIHHKPNELSGGQQQRVAIARAIVMNP
SFLLADEPTGNLDTNSSIEIMKIFYQLNESGTTIVMVTHEQDIANHAKRILRLRDGNIIEDTPIANRITY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-33 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thit_1025 YP_003476857.1 ABC transporter NC_012469.1.7686878. Protein 3e-57 58
Thit_1025 YP_003476857.1 ABC transporter NC_008702.1.4606598. Protein 1e-52 51
Thit_1025 YP_003476857.1 ABC transporter CP001581.1.gene798.p Protein 6e-41 47
Thit_1025 YP_003476857.1 ABC transporter CP001581.1.gene598.p Protein 1e-39 44
Thit_1025 YP_003476857.1 ABC transporter NC_012469.1.7686946. Protein 3e-30 41