Gene Information

Name : HMPREF0868_0923 (HMPREF0868_0923)
Accession : YP_003475231.1
Strain : Clostridiales genomosp. UPII9-5
Genome accession: NC_013895
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : 2.4.1.-
Position : 842772 - 843470 bp
Length : 699 bp
Strand : +
Note : identified by match to protein family HMM PF02397

DNA sequence : 
GTGGAGGCGTACGTGAACACGGAATACAGAAACAGCAATGACTTATTTTCGTATGATGACTTACAACGTTTACAACTATT
ACTGGAAATTAAGCCCTATGTACTTACCAGGTCTCAATATTTATACAATATTTTTCTAAAGCGTCTTTTGGACATAATAA
TCGCATCACTAGCCATTATACATCTCTTACCGGTTTTTATTGTAATTTCATTCATCATTGCCTTTGAATCCGGTTTGCCC
ATATTTTTTCGCCAACAGCGCGTGGGCAGAGGCGGAACCTTATTTAATATTTGTAAATTCCGTACAATGTTTGTCAATGC
ACCAAAAAATGTATCAACATTTGAAATGCGCAATTCGGAATCTTATATTACGAAAGTAGGGAAGGTCCTTCGCCGGACAA
GTTTGGATGAATTGCCGCAACTATTGAATGTTTTACAAGGGAAGATGAGTTTAATCGGTCCGCGTCCGCTGATCCCGAAA
GAAAAAGATATGGATTATTTGCGTAAATACAATGGAATATATCAGCTACGGCCGGGGATAACCGGATTGGCTCAAATCAG
AGGCAGGGATTTGATGGAAATCGATCAAAAAATACACCTCGATTGCGAGTATTTGCGCGGTTTAAGCTTTAAAACTGACT
TAAAAATCTTCTTTCAAACTTTTTTGGTTGTCTTTCGCAAAGATGATGTGGCGTTTTAA

Protein sequence : 
MEAYVNTEYRNSNDLFSYDDLQRLQLLLEIKPYVLTRSQYLYNIFLKRLLDIIIASLAIIHLLPVFIVISFIIAFESGLP
IFFRQQRVGRGGTLFNICKFRTMFVNAPKNVSTFEMRNSESYITKVGKVLRRTSLDELPQLLNVLQGKMSLIGPRPLIPK
EKDMDYLRKYNGIYQLRPGITGLAQIRGRDLMEIDQKIHLDCEYLRGLSFKTDLKIFFQTFLVVFRKDDVAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0868_0923 YP_003475231.1 sugar transferase VFG1309 Protein 1e-25 44
HMPREF0868_0923 YP_003475231.1 sugar transferase VFG1369 Protein 3e-24 44