Gene Information

Name : HMPREF0868_1201 (HMPREF0868_1201)
Accession : YP_003475482.1
Strain : Clostridiales genomosp. UPII9-5
Genome accession: NC_013895
Putative virulence/resistance : Unknown
Product : DNA-binding helix-turn-helix protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 552662 - 553015 bp
Length : 354 bp
Strand : -
Note : identified by match to protein family HMM PF01381

DNA sequence :
ATGCGTAAAAAAGAAGATAAATATGATTTTAGAGCCTTTGGTTTAGCCATTAAAGAAGCTCGATTGAAACGAGGTTTAAC
TCGTGAACAAGTGGGAGCATTGATTGAAATTGACCCACGGTACTTAACTAATATTGAAAATAAAGGGCAACACCCCAGCA
TACAAGTTCTTTATGACCTTGTATCGTTACTTCATGTTTCCGTTGATGAATTTTTCTTACCTGCTAATAACTTGGTAAAA
AGCACCCGACGATTACAGATAGAGAAATACATGGATAGCTTTACAGACAAAGAACTATCCTTAATGGAATCTTTAGCCAG
CGGTATCAACGAAGCAAGAAACATCGAAGACTAA

Protein sequence :
MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDLVSLLHVSVDEFFLPANNLVK
STRRLQIEKYMDSFTDKELSLMESLASGINEARNIED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0926 YP_001200484.1 Tn916, transcriptional regulator Not tested 89K Protein 6e-50 100
SSU05_0920 YP_001198286.1 Tn916, transcriptional regulator Not tested 89K Protein 6e-50 100