Gene Information

Name : HMPREF0868_1219 (HMPREF0868_1219)
Accession : YP_003475496.1
Strain : Clostridiales genomosp. UPII9-5
Genome accession: NC_013895
Putative virulence/resistance : Resistance
Product : DNA-binding helix-turn-helix protein
Function : -
COG functional category : K : Transcription
COG ID : COG3655
EC number : -
Position : 535352 - 535558 bp
Length : 207 bp
Strand : +
Note : identified by match to protein family HMM PF01381

DNA sequence : 
ATGAGAACTTTCAGTTATAAGAAGTTGTTTAAAAAACTTATAGATTTGGATATGACTAATAATGAATTGATGGAGAAGAC
AAATATCAGTAAAAGTACATTTTATAAGATAAAGAATGGACAGAATGTTACCACAGATATTTTGCTTAGAATTTGTAATG
CTTTGGATTGTGATATTGAGGAAATACTGGAGTGTGTAGAAGATTAG

Protein sequence : 
MRTFSYKKLFKKLIDLDMTNNELMEKTNISKSTFYKIKNGQNVTTDILLRICNALDCDIEEILECVED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01461 YP_003783861.1 hypothetical protein Not tested PiCp 5 Protein 1e-07 45
CpC231_1455 YP_005683818.1 hypothetical protein Not tested PiCp 5 Protein 9e-08 45
CpI19_1462 YP_005685904.1 hypothetical protein Not tested PiCp 5 Protein 9e-08 45
Cp1002_1456 YP_005681720.1 hypothetical protein Not tested PiCp 5 Protein 4e-07 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0868_1219 YP_003475496.1 DNA-binding helix-turn-helix protein DQ212986.1.gene3.p01 Protein 1e-09 47