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Name : smpB (HMPREF0868_1304) Accession : YP_003475571.1 Strain : Clostridiales genomosp. UPII9-5 Genome accession: NC_013895 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 447256 - 447723 bp Length : 468 bp Strand : + Note : identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086 DNA sequence : ATGGCACGAGCTAAAGGCATAAAAGTAGTAGCCGACAACCGCAAAGCGCACTATGACTACATAGTTTTAAATAAATACGA AGCAGGTATTGTTTTAAGCGGGACTGAAGTCAAGTCGATTCGCGGCGGGAACGTTAACCTCAAGGACAGCTATGCTAAAA TTCTGCATGGAGAAATGTGGGTGATCGGCATGCATATCAGTCCGTATGAACAGGGCAACCGCTACAATTTAGACCCAATG CGCAGTCGCAAACTTTTGCTCCACAAACAGGAAATTGACCGGCTGTTTGGTAAAATCAAACAAGAAGGACTCACCTTGGT TCCGTTGCAACTATATTTTAAGAATGGCAGAGTTAAGCTTGAGCTGGGGCTTGCCAAAGGCAAAAAAAACTATGACAAAC GCCAATCCATGATCCAGCGCACGGTAAAACGCGACATAGATCGCGCCTTGAAAAATAGTAACAAATAA Protein sequence : MARAKGIKVVADNRKAHYDYIVLNKYEAGIVLSGTEVKSIRGGNVNLKDSYAKILHGEMWVIGMHISPYEQGNRYNLDPM RSRKLLLHKQEIDRLFGKIKQEGLTLVPLQLYFKNGRVKLELGLAKGKKNYDKRQSMIQRTVKRDIDRALKNSNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 6e-37 | 57 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 1e-36 | 54 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 3e-25 | 43 |
