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Name : hsdM (HMPREF0868_1370) Accession : YP_003475628.1 Strain : Clostridiales genomosp. UPII9-5 Genome accession: NC_013895 Putative virulence/resistance : Unknown Product : type I restriction-modification system subunit M Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 379537 - 381105 bp Length : 1569 bp Strand : - Note : identified by match to protein family HMM PF02384; match to protein family HMM TIGR00497 DNA sequence : ATGACCCTAGACACTAAAAAAGAACAGGAACGTGACGAACTTCACCGTGCTATATGGGCAATTGCTGATGAACTTCGTGG TGCAGTAGATGGCTGGGACTTTAAAAACTATGTGCTTGGCACTATGTTCTATAGATATATTTCTGAAAACATTACTAACT ATATTAACGCAGGTGAAATTGAAGCCGGCAATACTGAATTCGATTACGCACAGATGTCTGACGATGATGCGGAAGAAGCA AGACAGAGTCTTGTTGAAGAAAAAGGCTTCTTTATCCTTCCCTCAGAACTTTTCTGCAATGTTAAAGCAAAAGCTAAAGG TGATGAGAATCTTAATGAAACACTGGAGAAGGTATTCCGTCATATTGAAGAGTCAGCAAAAGGAAGTGAGTCTGAATCTG ATTTTGCAGGTCTTTTTGATGACTTTGATGTAAACAGTAATAAGCTTGGCTCTACAGTAGCAAAGAGAAACGAAAAGCTC TGCAAGCTTCTTGATGGTGTGGCTGATATGAATATTGGGGATGTTAAGAACCACGATATTGATGCATTCGGTGATGCTTA TGAATACCTCATGACAATGTATGCATCAAATGCCGGTAAATCAGGTGGTGAGTTCTTTACTCCTGCTGATGTATCAGAAC TTCTTACAAGAATTGGTACAGTTGGTAAAACTGAAATTAATAAGGTTTATGACCCTGCCTGTGGTTCAGGTTCGCTGCTT TTAAAGGCAGAAAAAGTACTTGGCAGAGATAAGATTCGTAATGGTTTCTATGGACAGGAAATCAATATCACAACCTACAA CCTTTGCCGTATCAACATGTTCCTACATGATATCGGCTTTGATAAATTCAATATTGCTTGTGAAGATACACTTATTGCAC CTGCACATTGGGATGATGAGCCATTTGAACTGATTGTTTCAAATCCCCCATATTCTATTAAATGGGCCGGTGATGATAAT CCATTACTTATCAATGACCCTCGTTTTGCACCTGCAGGTGTTCTTGCTCCAAAGAGTAAAGCAGACTTAGCTTTCATTAT GCACAGTCTTTCCTGGCTTGCGTCAAATGGAACGGCTGCAATTGTATGCTTTCCAGGTATTATGTACCGTGGTGGTGCTG AACAGAAAATCCGTAAATATCTGATTGATAACAACTATGTTGACTGTATTATCCAGTTACCTTCTAATCTTTTCTTCGGT ACATCAATAGCAACCTGCATTATGGTGCTTAAGAAAGGTAAAGAAGACAATAAGACTTTATTCATTGATGCGACAAATGA ATGCATTAAAGTCACAAATAACAATAAGCTCACCCGGAAAAACATGGATAAGATTGTTGACTGCTTTGCTAACCGTCGAG AAATCGAGCATTTTTCACATCTTGCTACATATGATGAGATTGCAGAAAATGATTACAACCTTTCGGTGTCAACCTATGTC GAAGCTGAGGATACGAGAGAAAAGATTGATATTGTAAAACTTAATGCCGAGATTAAAGAAATCGTTGCTCGTGAGCAGGT CCTTCGTGATGAGATTGATAAAATCATTGGAGAAATCGAGGTGGGATGA Protein sequence : MTLDTKKEQERDELHRAIWAIADELRGAVDGWDFKNYVLGTMFYRYISENITNYINAGEIEAGNTEFDYAQMSDDDAEEA RQSLVEEKGFFILPSELFCNVKAKAKGDENLNETLEKVFRHIEESAKGSESESDFAGLFDDFDVNSNKLGSTVAKRNEKL CKLLDGVADMNIGDVKNHDIDAFGDAYEYLMTMYASNAGKSGGEFFTPADVSELLTRIGTVGKTEINKVYDPACGSGSLL LKAEKVLGRDKIRNGFYGQEINITTYNLCRINMFLHDIGFDKFNIACEDTLIAPAHWDDEPFELIVSNPPYSIKWAGDDN PLLINDPRFAPAGVLAPKSKADLAFIMHSLSWLASNGTAAIVCFPGIMYRGGAEQKIRKYLIDNNYVDCIIQLPSNLFFG TSIATCIMVLKKGKEDNKTLFIDATNECIKVTNNNKLTRKNMDKIVDCFANRREIEHFSHLATYDEIAENDYNLSVSTYV EAEDTREKIDIVKLNAEIKEIVAREQVLRDEIDKIIGEIEVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0053 | YP_300143.1 | type I restriction-modification system methyltransferase subunit | Not tested | SCC15305cap | Protein | 5e-101 | 42 |
| SAMSHR1132_03780 | YP_005324900.1 | putative type I restriction enzyme modification protein | Not tested | vSa¥á | Protein | 5e-99 | 41 |
| SAMSHR1132_16570 | YP_005326167.1 | restriction-modification system, M subunit | Not tested | vSa¥â | Protein | 1e-99 | 41 |
