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Name : HMPREF0868_1409 (HMPREF0868_1409) Accession : YP_003475664.1 Strain : Clostridiales genomosp. UPII9-5 Genome accession: NC_013895 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 329123 - 330841 bp Length : 1719 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : ATGAAACAATTTCTAATGCGTAATTTTGCCCTTACGGATGAAGGCGCAAAAGGGGTTTTTAAAGCCGGGAGGGCAAGTTT CGCTGTTTTTGTCATCAACCTTTGCCCGGCATTTATACTAATGTTTTGGCTGGATCAACTGCTTTTTAATCATGCCAGGT CAACCGGCTTCTATCTTTGTGCTGCAGTTCTGACCTTGGTCGTCATGTTCTTTATTTTGAACCGAGAGTACGACTTGCAA TATAACGAAACATATAAAGAGGCGGCCAATTTACGGATAGGTATAGCGAAGAAATTATCCGAATTGGAGATGTCCTACTT CTACACCCATGATTTGTCTGATCTTTCACAGAGTATCATGGCTGATGTGGCGGCAATCGAGCATGCTTGCAGCCATGCGG TGCCAGCTGCCATCGGCTTTGCCTTTTTTATGCCGTTGATGACAATTATGATGTTGCTGGGAAGCTGGAAGATGACCTTG GCGGCCGTAGGTCCGACTTTGCTGTCCTTTTTGCTTATCCTATTGGCCAAAAACACCTCAAAACGCTTATATGACAAGTT CTATGTTCGTCTACGCCGCAATTCGGCGGCATTTCAGGAGCGTATCGAGCTGGCAAAAGAAATAAAGGCTTTCAACATGT CGGAAAAAATCAAGGCTGAGCTTTACTCTCGTTTGGATGATTCAGAGAAAATTCAATGGCAAACAGAATTGGGCAATGGG CTGATAATGTTGTTTTCAGGCATATTTTCTTACTTTTCATTGGCTCTGACCATTCTTGTCGGCGTGTTCCTTTTACAGCG CGGTGAAATTTCGTTGCTGTACCTGCTTGGCTACCTTTTGGCCGCAATAAAAATAAAGGATGTTGTCGATGCGAATATGG AATTTTTCATGGAAATAAATTATGTCGATTCAGCAGTCAAACGGATAAATGAAATTCGGCAAGCGAAGGTGATGCCCGGC CGGGATACACAATTTTCGCGGTTCGACATTGATGTGAAAAATTTGGATTTTTCCTATGATGGACGGAAGAAAGTCTTGGA CGGGGTAAGTTTCTCGGCACCGCAAGGCAAGGTGACGGCTCTGGTTGGTGAGTCCGGCTGTGGAAAAACGACGCTGCTGC GCCTTATTTCACGTCTGTATGATTTTGATAAGGGTGAGGTTTTGATCGGTGGGGAAAACATAAAGCAAGTATCGACTGAA AGCCTTTATCGCAATATATCAATCGTTTTTCAGGACGTAAAACTGTTCAATACCACGATTATGGAAAACATCCGCATCGG CCGCCAAACCGCCACGGATGAAGAAGTTAAGGAAGCAGCTCGCCTCGCCAACTGCGACTTCATCAACGAGTTGAAGGACG GATTTGCCACGACCATCGGCGAAAACGGTGAACAACTTTCCGGCGGAGAAAGGCAAAGAATATCCATTGCCAGGGCCTTT TTAAAGGATGCGCCCATTCTGATCCTCGACGAAATCGCTTCAAGTTTGGATGTGGACAACGAGAGAAAGATTCAGTGCTC ATTGAATAAATTGATTGCCGACAAGACGGTAATCATTATTTCCCACCGCATGAAGTCCATTGAAAATGCTGATGAGATTG TGGTTTTGCATAACGGACGGGTAGAGCAGATCGGTCGCCATCATGACCTTTTAAAAACATCAGCAAGCTATGCCCGCCTT ATCGAAAAAACGAAGGCCGCGGAAGATTTTGTTTACTAA Protein sequence : MKQFLMRNFALTDEGAKGVFKAGRASFAVFVINLCPAFILMFWLDQLLFNHARSTGFYLCAAVLTLVVMFFILNREYDLQ YNETYKEAANLRIGIAKKLSELEMSYFYTHDLSDLSQSIMADVAAIEHACSHAVPAAIGFAFFMPLMTIMMLLGSWKMTL AAVGPTLLSFLLILLAKNTSKRLYDKFYVRLRRNSAAFQERIELAKEIKAFNMSEKIKAELYSRLDDSEKIQWQTELGNG LIMLFSGIFSYFSLALTILVGVFLLQRGEISLLYLLGYLLAAIKIKDVVDANMEFFMEINYVDSAVKRINEIRQAKVMPG RDTQFSRFDIDVKNLDFSYDGRKKVLDGVSFSAPQGKVTALVGESGCGKTTLLRLISRLYDFDKGEVLIGGENIKQVSTE SLYRNISIVFQDVKLFNTTIMENIRIGRQTATDEEVKEAARLANCDFINELKDGFATTIGENGEQLSGGERQRISIARAF LKDAPILILDEIASSLDVDNERKIQCSLNKLIADKTVIIISHRMKSIENADEIVVLHNGRVEQIGRHHDLLKTSASYARL IEKTKAAEDFVY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0584 | NP_814349.1 | ABC transporter ATP-binding protein/permease | Not tested | Not named | Protein | 6e-144 | 54 |
| ef0102 | AAM75305.1 | EF0102 | Not tested | Not named | Protein | 5e-144 | 54 |
