|
Name : HMPREF0868_1410 (HMPREF0868_1410) Accession : YP_003475665.1 Strain : Clostridiales genomosp. UPII9-5 Genome accession: NC_013895 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 327385 - 329145 bp Length : 1761 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : ATGAAAGTCTATAAAAAATTATTGGCTTACGTGCCGGCGATGATGCCGTTGGTATATATAGCTATTTTGGGCTCGGTTTT AGCCTGCTTGCTGATTAACTACGGTTACTATTTAATTTACGGTTTCCTTAAAAAGCTGGTGCTCGAAGCGAATACGGCTG CGGCAACGACGTTTGCCGTCAAGATAGCGGCATTTATTCTGGTCGGGAACGTCATATACTTCTTTGCCGTTTTGCAGGCT CACCGTGTTGGATTGCGCTTGGAGACCGTTCTCAAGAAGCGGGGAGCAGAAGGTTTGAGTAAGGCTGGTTTCCGTTTTTT TGACACCCACCCGTCGGGGACGGTTCGTAAAGTCATTGATGACAACACCGCTTTGACACATAAAATTGTGGCACATATGA TACCGGACAATACCAAAGCTATGATAACGCCTGTCATTATAATTGCTTTAGGCTTCAGTATCAGTGTGCGCGTGGGAGTG TGCATCTTCATTTTGACGCTGTTGGCGGTCGCAATTTTAATGTCGATGATGCGCGGCAGCGATTTCATGAAAGTTTATCA GGAAGCGTTGGATAAATTATCCGGGGAAACGGTAGAGTACATTCGCGGCATTTCTGTTATTAAAATTTTCGGAGTTTCGG TCAGTTCAATGAGAAAACTTTTTAAGCTGGTGCACGAATACTCGGACTACGCCTACAAATATTCGCAGAAATGCAAAAAG CCGTATGTGATATATCAGTGCATGTTTTTCGGGCTGTTGGCCATATTGACCATTCCGACGGTTTTTTGTCTATCGGCCCT GGGTGATCCCCGCCTTCTTGCGCTGGATTTGGTGATGATCTTATTCTTGGCCGGCCTGATGTTCGCCGCCATGATGCAGG TTATGTACGTAAATATGTATATATTTCAGGGGAATTATGCCGTCGACACCTTGGAAAAATTGTACGCGCAAATGGCCGAA GATGAAATTTCATTCGGGCAAGTCACGACTTTTGCCGACCATTCCATTGAATTTAAAAATGTAACCTTTGCTTATGCTGA CAAAAATGTTCTGGAAAATCTTTCGTTTAAACTGGATCAAGGCAAGATTTATGCCTTGGTTGGGGCTTCCGGTTCCGGTA AATCGACTGTCGCTAAACTTATTTGCGCCTACTACAGAATTAAAGATGGCGAAATTTTGATCGGCGGCAAAAGGGCGGAA GAATACACACAGGAAGCTTTAATCAAGGAAATTTCCTTCGTTTTCCAAGACAACAGGCTTTTCAGCGACACTATATATAA TAATGTCGCCATGGCGCGAGAAAATGCTACACACGATGAAATCATGCGGGCCATGTCATTGGCAGACCTGGACAGCCTTT TGGCTAGTTTGGAACAGCATGAACAAACCCGCGTCGGCAGCGACGGGATTCGGCTTTCCGGCGGTGAGGCGCAACGGGTG GCGATTGCCAGAGCAATTTTGAAAGATTCACCGATTGTCATTATGGATGAAGCATCGGCCTCGGTAGATCCGGATAATGA ACATGAGTTGCAAAAGGCCTTTAAGCATCTGATGCACGGCAAAACGGTGGTGATGATCGCGCATCGTTTGTCGGCTATCA AAGGCGTGGATGAGATTTTACTCGTCGATGACGGCAAGATTGCCGAAAGAGGGTCGCATGACGAATTAATGGCGCACGAA GGGAAATATAAGCGGCTTTACAATATGTATACTGCAGCAAATGAATGGAGGGTCAGTGATGAAACAATTTCTAATGCGTA A Protein sequence : MKVYKKLLAYVPAMMPLVYIAILGSVLACLLINYGYYLIYGFLKKLVLEANTAAATTFAVKIAAFILVGNVIYFFAVLQA HRVGLRLETVLKKRGAEGLSKAGFRFFDTHPSGTVRKVIDDNTALTHKIVAHMIPDNTKAMITPVIIIALGFSISVRVGV CIFILTLLAVAILMSMMRGSDFMKVYQEALDKLSGETVEYIRGISVIKIFGVSVSSMRKLFKLVHEYSDYAYKYSQKCKK PYVIYQCMFFGLLAILTIPTVFCLSALGDPRLLALDLVMILFLAGLMFAAMMQVMYVNMYIFQGNYAVDTLEKLYAQMAE DEISFGQVTTFADHSIEFKNVTFAYADKNVLENLSFKLDQGKIYALVGASGSGKSTVAKLICAYYRIKDGEILIGGKRAE EYTQEALIKEISFVFQDNRLFSDTIYNNVAMARENATHDEIMRAMSLADLDSLLASLEQHEQTRVGSDGIRLSGGEAQRV AIARAILKDSPIVIMDEASASVDPDNEHELQKAFKHLMHGKTVVMIAHRLSAIKGVDEILLVDDGKIAERGSHDELMAHE GKYKRLYNMYTAANEWRVSDETISNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0101 | AAM75304.1 | EF0101 | Not tested | Not named | Protein | 5e-136 | 50 |
| EF0583 | NP_814348.1 | ABC transporter ATP-binding protein/permease | Not tested | Not named | Protein | 7e-136 | 50 |
