Gene Information

Name : HMPREF0868_0209 (HMPREF0868_0209)
Accession : YP_003474548.1
Strain : Clostridiales genomosp. UPII9-5
Genome accession: NC_013895
Putative virulence/resistance : Virulence
Product : putative ferrichrome ATP binding cassette transporter, ABC protein FhuC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1678512 - 1679339 bp
Length : 828 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGGAAATAAGAATCAATCATTTAAATGTCGGTTATGGCCAGCGAAAAATCATCAATAATTTTTCCGCCACTTTACGCGA
AAAAGAAATTCTTTGTCTAATCGGCCCCAACGGCTCAGGTAAATCAACTCTTTTAAAAGCTTTGATCGGGATCTTACCCT
ATCAATCCGGGGAAATTTTTTTAGACGGGCGCGAATTGCAAACTTGCAAGCCGAAAGAGGTGTCGCAAAAGATTGCTCTT
TTACCGCAGATACATCATGCTCCCGGCGATTTTACCGTGCGTGAGCTGGTAAGCTATGGGCGGATGCCGCATCAAAAAAT
GTTCCGTCCGGACAGCAGCTCCGACCATGATATCGTCACTCACGCTATGGAACGTACGCGTACTCTAGTTTTTGCTGATC
GGCACATCAAAGAGTTGTCAGGAGGCGAATTGCAAAGGGTATGGTTGGCTTGTTCATTGGCACAACAGCCGCGAATTTTG
TTTTTGGATGAGCCGACCACCTATTTGGATATTTGTCATCAGCTGGAAATGATTGAGTTGGTGCAAAAGCTTTGCTACGA
AGACGGCTTGGGTGTCGTCTTGGTTTTGCACGATCTGAGTCAAGCTCTCGATATGAGTGATCGAGTTATCGTGTTACGCA
ACGGGGAAAAATACGCCGAAGGGCCGCCGGATGAGGTTATTGAACCGGAAATGTTGCGTGAAGTATACGGAGTCGGGTGT
CGGCTGGTGCCGGTACAAGATCGTCGCCGGCCGGTGATTTCTTTCGATCGGGTCTGCCGCCTTGTCGCGGAGCAGCAAAA
TCAAGCGGAAACAACATTATTAAAATAA

Protein sequence : 
MEIRINHLNVGYGQRKIINNFSATLREKEILCLIGPNGSGKSTLLKALIGILPYQSGEIFLDGRELQTCKPKEVSQKIAL
LPQIHHAPGDFTVRELVSYGRMPHQKMFRPDSSSDHDIVTHAMERTRTLVFADRHIKELSGGELQRVWLACSLAQQPRIL
FLDEPTTYLDICHQLEMIELVQKLCYEDGLGVVLVLHDLSQALDMSDRVIVLRNGEKYAEGPPDEVIEPEMLREVYGVGC
RLVPVQDRRRPVISFDRVCRLVAEQQNQAETTLLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-39 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0868_0209 YP_003474548.1 putative ferrichrome ATP binding cassette transporter, ABC protein FhuC BAC0164 Protein 6e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0868_0209 YP_003474548.1 putative ferrichrome ATP binding cassette transporter, ABC protein FhuC VFG1042 Protein 6e-38 43
HMPREF0868_0209 YP_003474548.1 putative ferrichrome ATP binding cassette transporter, ABC protein FhuC VFG0925 Protein 2e-40 42