Gene Information

Name : argF (HMPREF0868_0360)
Accession : YP_003474698.1
Strain : Clostridiales genomosp. UPII9-5
Genome accession: NC_013895
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 1462989 - 1463981 bp
Length : 993 bp
Strand : -
Note : identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658

DNA sequence :
ATGGCTAAAAATTTAAGCGGAAGATCATATTTAAAACTGCTGGACTTTGAACCCTCAGATGTACGCTATCTGCTTGATTT
ATCCAAAAATTTTAAAGATATGAAACGTGCCGGTGTGCCGCATCGCTGGTTGGAAGGGAAGAATATCGTTCTGCTTTTCG
AGAAAACTTCTACTCGCACCCGCTGCTCTTTTGAGGTTGCCGGAATGGATCTGGGCATGGGCGTTACCTACCTTGATCCG
GGCTCATCCCAAATGGGCAAGAAAGAAAGCATCGCTGACACCGCACGGGTACTCGGCAGAATGTATGACGGTATTGAATA
TCGTGGCTACAGCCAAGATTTGGTAACTGAACTGTCCAATTACGCCGGTGTTCCGGTTTGGAATGGCCTGACCGACCAAT
TCCATCCGACCCAAATGTTGGCGGATTTGCTGACTATTGAAGAACATTTTGGCTATTTGAAAGGCCTGAACTTCGTCTTT
ATGGGCGATGCCAGAAACAATATGGGTAACTCCTTAATGATAGCCTGCGCCATGATGGGCGTGAACTACACAGCCTGCGC
TCCAGCTGAACTTTTCCCGGCGGAGGACCTCGTAGTTAAAGCCCGTGAAATAGCCGCTCGCCAGGGCTGCACTGTAACCC
TCGAGTCCGACGTGAAGAAAGCTACGGCCGGCGCGAACGTTATTTATACTGATATTTGGGTATCTATGGGCGAACCCGAC
GAGATCTGGGCGCACCGAATCAAGGTTTTGAAACCATACCAAGTAAATAAAGCGGTTATGGACAACGCAGATCCTGAAGC
GATTTTCATGCACTGCCTGCCGTCCTTCCACGATCGCAAAACCACGATCGGTGAGCAAATTTTCGAGAAATTTGGCTTGC
CGGAGATGGAAGTTACCGATGAAGTGTTTGAATCGGACAAGTCCGTCGTGTTTGAGGAAGCAGAAAACAGAATGCACACA
ATCAAAGCAGTTGTTTATGCTACCTTGAGATAA

Protein sequence :
MAKNLSGRSYLKLLDFEPSDVRYLLDLSKNFKDMKRAGVPHRWLEGKNIVLLFEKTSTRTRCSFEVAGMDLGMGVTYLDP
GSSQMGKKESIADTARVLGRMYDGIEYRGYSQDLVTELSNYAGVPVWNGLTDQFHPTQMLADLLTIEEHFGYLKGLNFVF
MGDARNNMGNSLMIACAMMGVNYTACAPAELFPAEDLVVKAREIAARQGCTVTLESDVKKATAGANVIYTDIWVSMGEPD
EIWAHRIKVLKPYQVNKAVMDNADPEAIFMHCLPSFHDRKTTIGEQIFEKFGLPEMEVTDEVFESDKSVVFEEAENRMHT
IKAVVYATLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-91 59
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-91 59
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-91 59
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-91 59
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-91 59
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-91 59
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 1e-90 57