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Name : HMPREF0868_0489 (HMPREF0868_0489) Accession : YP_003474820.1 Strain : Clostridiales genomosp. UPII9-5 Genome accession: NC_013895 Putative virulence/resistance : Unknown Product : putative type I restriction-modification system, M subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 1325234 - 1326739 bp Length : 1506 bp Strand : - Note : identified by match to protein family HMM PF02384 DNA sequence : ATGGCAGATAAATCAAAAGCTACTCTTGGTTTTGAGAAGCAAATCTGGGATGCGGCATGCGTGCTGTGGGGGCACATTCC GGCATCAGAATATAGAAACGTAATTATCGGGCTTATTTTCTTGAAGTACATTTCTACGGCATTTGACAAGAAATATCAAC AGCTTATTGCTGAAGGAGATGGATTTGAGAATGATCCTGATGCATATCTTGAAGATAACGTATTCTTCGTACCGGAGGAT GCCCGTTGGGAAAAGATTGCCAAAGCAGCACATGAGCCGGAAATTGGAAAAGTTATTGATGAAGCCATGCGTGCAATCGA GGCTGATAATAAAAAACTCAAAAACGTACTTCCAAAGAATTATGCCAGTCCGGATCTTGATAAGAAAATCCTCGGCAATG TCGTTGACCTCTTTACAAACATGGATATGAGCGATACGGAAGGCAACCGTGATGTTCTCGGCAGAACCTACGAATACTGC ATCGCTCAATTCGCCGAAAAAGAAGGCAAAGGTGGCGGTGAATTCTATACGCCGTCAAGCATCGTAAATACACTAGTGGC AATTTTAAAGCCTTATGCAAATTGTCGCGTATATGATTGCTGCTGTGGCAGTGGCGGCATGTTCGTACAGAGTGCAAAGT TCATTCAGGCACACTCCGGTAACCGAGGCTCAATTTCAATTTATGGTCAGGAAGCTAATCCGGATACATGGAAGATGGCA ATCATGAATCTTACGATTCGCGGGCTTGATGCAGACCTTGGTGCTTATCATGCAGACACATTTACAAATGACCTTCATCC AACATTGAAAGCAGACTTCATTCTCGCCAACCCTCCCTTCAACTACAATCCGTGGGGACAGGAAGATCTGAAGGACGACG TTCGCTGGAAATACGGTGTACCTCCTGCAAGCAATGCCAACTATGCATGGATTCAACATATGATTCATCATCTTGCCCCG AGCGGAAAAATCGGGCTAGTTCTTGCAAACGGAGCATTGTCTTCCCAGAATGGTGGCGAGGGCGAGATCAGAAAGAAAAT CATTGAAGATGACTTAATCGAAGGTATCATCGCTATGCCTCCCCAACTCTTCTATAGCGTAACTATCCCCGCGACGCTTT GGTTCATTACAAAGGGCAAGAAACAAAAAGGCAAAACAGTTTTTATCGATGCACGAAAAATGGGACACATGGTAGACCGT AAGCATCGAGACTTTACCGAAGAAGATATCCAAAAGCTCGCAGATACAATTGAGGCTTTCCAGAACGGCACGCTTGAAGA TGAAAAAGGTTTCTGCTCTGTAGCGACGATTCAGGATATAGCAAAGCAGGATTACGTTTTGACTCCGGGACGCTATGTTG GTATTGAAGAGCAGGAAGATGATGGTGAACCGTTTGATGAGAAAATGACCAGACTGACATCAGAACTTTCTGACATGTTC GAACGCTCTCATGAGCTTGAAGACGAGATTCGTAAGAAGTTGGGGGCAATTGGATATGAAATATAA Protein sequence : MADKSKATLGFEKQIWDAACVLWGHIPASEYRNVIIGLIFLKYISTAFDKKYQQLIAEGDGFENDPDAYLEDNVFFVPED ARWEKIAKAAHEPEIGKVIDEAMRAIEADNKKLKNVLPKNYASPDLDKKILGNVVDLFTNMDMSDTEGNRDVLGRTYEYC IAQFAEKEGKGGGEFYTPSSIVNTLVAILKPYANCRVYDCCCGSGGMFVQSAKFIQAHSGNRGSISIYGQEANPDTWKMA IMNLTIRGLDADLGAYHADTFTNDLHPTLKADFILANPPFNYNPWGQEDLKDDVRWKYGVPPASNANYAWIQHMIHHLAP SGKIGLVLANGALSSQNGGEGEIRKKIIEDDLIEGIIAMPPQLFYSVTIPATLWFITKGKKQKGKTVFIDARKMGHMVDR KHRDFTEEDIQKLADTIEAFQNGTLEDEKGFCSVATIQDIAKQDYVLTPGRYVGIEEQEDDGEPFDEKMTRLTSELSDMF ERSHELEDEIRKKLGAIGYEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 8e-137 | 56 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 1e-137 | 56 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 3e-138 | 56 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 1e-102 | 45 |
