|
Name : nifJ (HMPREF0868_0613) Accession : YP_003474936.1 Strain : Clostridiales genomosp. UPII9-5 Genome accession: NC_013895 Putative virulence/resistance : Virulence Product : pyruvate synthase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 1189583 - 1193131 bp Length : 3549 bp Strand : - Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 DNA sequence : ATGACAAAGAAGTTGAAGTACATGACATGTGACGGTAACACGGCAGCCGCCTATGCCTCATATGCATTTACTGAAGTGGC CGGTATCTATCCGATTACCCCTTCATCACCGATGGCAGACTATGTTGACCAGTGGGCGCAAGCGGGTCGTAAAAACATTT TCGGGCAAACGGTAAACGTTATTGAAATGCAATCTGAAGGGGGTGCTTCCGGTGTCGTGCATGGTTCCCTTGCCGCCGGT GCTTTGACCACCACTTACACCGCTTCACAAGGCTTGCTCCTGATGATTCCTAATATGTATAAAATCGCCGGTGAATTGCT ACCATGCGTTTTCCATATTTCAGCTCGTACATTGGCGACGCACGCCTTGTCAATTTTCGGTGACCATTCCGATGTAATGG CTGCAAGACAAACAGGTTTCGCTATGTTGTTCGGCAGCAGCGTGCAGGAAGTTGTATGGATGGCCTGTGTAGCTCATTTA TCGGCTATTAAGAGTCGGGTTCCGTTCATGGATATCTTTGACGGTTTCCGTACTTCGCACGAAATTCAAAAGATTCAAGT ACCGGAATATGATGACTTGGCTGAGCTGGTTGATTATGAGGCGGTTAAGGAATTCCGTGAAAGAGCTCTATCACCTAATC ACCCGACCTTGCGTGGTTCGGCGATGAACCCTGATATTTTCTTCCAGGTTCGCGAGGCTTCCAATCGTTTCTACAATGAG TTGCCTGATATTGTTGAACATTATATGAATGAAATCAACAAATTAGCCGGCACCAACTACAAACTTTACGATTACTACGG TGATCCGGAAGCTGAAAGAGTTGTTGTTTGCATGGGCTCAGCCGTGGAAGCGTTGAAAGAAACCGTCGACTTCTTGACGG CAAAGGGCGAAAAAGTTGGTGTGCTGAATGTTCACCTGTTCCGTCCGTTCGATACCAAGCGCTTTGTTGACGCTTTGCCG AAGACGACTAAGAAAATCGCTGTTCTGGATCGTACGAAAGAACCCGGTGCGCAAGGCGAGCCGCTATTCCAAGACGTTGT TACTGCTTATTATGGCCACGAGAATCCGCCGATTATTGTGGGCGGACGTTACGGTTTAGGTTCAAAGAACACTACTCCGG GTGATTTCTTGGCCGTATTCAAACATCTTAATGAAGATAAACCGCGTCATAACTTTACAATTGGCATTATTGATGATGTC AGCAACCTGTCTTTGGCTCCGATTAAAGGTATTAACACAGTGCCGGCCGGTACAGTTTCCTGCCGTTTCTGGGGTCTTGG TTCTGATGGTACGGTAGGTGCCAACAAAAACTCGATTAAGATTATCGGTGATCATACTGACATGTACGCACAAGCCTACT TCAGCTATGACTCTAAAAAGTCAGGTGGTATAACAATTTCCGACCTGCGTTTTGGTAAATCGCCAATTCACTCCACCTAC TTGATTGATATGGCTGATTTTGCTTCCTGCTCGCAACAATCTTACGTCGACAAGTACGATATGCTTTCATCATTGAAAGA TAACGGGGTTTTCCTGCTGAATACCTTGTGGACGGATGAAGAATTAAATACCTTCCTGCCGGCTTCAATGAAACGGGCTA TTGCGACCAAGAAAATCCGTTTCTACACTATCGATGCGGTTGAAATTGCCAAGGGCCTCGGGCTCGGCGGCCGTACCAAC ACCGTAATGCAGGCAGCATTCTTTAAGCTGAGTAATATCATTCCGATTGAAGAAGCTGTCGAATACATGAAAAAAGCTAT CGTTAAATCCTACAGCAAAAAGGGCGATGAAATTGTTAAGATGAATTACGGCGCTGTAGATGCCGGTTGCGAAAAAATTC ATGAAGTCAAATATCCGGCCGATTGGGCGAACGCAGTTGACGGCCCGGCTAAATTACGTAACGTGCCTGAATTCGTTTCT AAGATTGCTGATGTCACCAATGCTCAGAACGGCGATAGCTTGCCGGTTTCGACCTTCCTTGGTATGGAAGATGGTACTTT GCCACAAGGTACGAGCAAATACGAAAAACGTGGTATCGCCGTTGATGTGCCGCACTGGATTCCGGAAAATTGTATCCAAT GTAACCAATGCTCGTATGTTTGCCCGCACGGCGTAATTCGTCCTTTCTTGGTTACCGAAGAAGAGGCGGCTAAGGCTCCG GCTACGATGACTACCATTAAGGGTACCAAACCTTATGACGGTTATAAATTCATCATTCAGCCGTCAGTTTTGGACTGCAC CGGTTGCGGATCCTGTGCCCAGGTTTGCCCGGCCAAGAACAAGGCTTTGGTAATGCAACCTATCGGCGAGAATATGCAAC AGAGTGAACACTGGACTTATTTGACCGAAAAAGTCACCAAAAAGCCTAATCCGATGAAGAGCAACATCGTCAAAGGTACG CAATTCAATATGCCGTACTTCGAATTTTCCGGTGCTTGCGCCGGGTGTGGTGAGACTCCTTATGCCAAGTTGGTAACTCA ACTATTTGGTGATAAGATGATGATTTCTAACGCTACTGGTTGTTCTTCGATTTGGGGTGGCTCGGCACCTTCCCAACCTT ATACAACCGATGAACATGGCCGCGGTCCTTCATGGGCAAACAGCTTGTTTGAGGATAACGCTGAACATGGCTTAGGAATG TTGCTCGGTGCAAAACAGTTGCGTAACCGTCTTAAAGAAAAATTGATGGAATTGAACCGTACTGTCACTGATGAAGCGGT AAAAGTTGCCGGTGCCAATTGGTTAGACAACATGGCCAAGACTGAAGGAACGATTGAATCGGCTCAATCCTTGGTCGAAG CACTCAGCAATTATCATACGGACAATCCGGATGAACAAAAACTTATCGCCGACATCATGGAAAACAAGGATTACTTAAGC AAACGTTCTACCTGGATATTCGGCGGCGACGGATGGGCATATGATATCGGTTACGGCGGTTTGGATCATGTCCTTTCAAC CGGTGAAGATATTAACGTTCTAGTCTTCGATACAGAAGTTTATTCCAATACAGGTGGTCAGGCTTCTAAATCAACTCCTA TGGGTGCTATTGCTCAGTTTGCTGCCGGTGGTAAGTCGGTTAAGAAGAAGGATCTGGGCATGATGGCTATGAGTTATGGT TATGTATATGTTGCTCAGATCGCTATGGGTGCCAACCAAGCTCAAACCTTGAAAGCTATAGCCGAGGCGGAAGCTTATCA CGGCCCGTCATTGATCATTGCTTACTCGCCTTGTATCAACCATGGTATCAAAGGCGGAATGACCAGATCTCAAGCCCGTG AGAAACAAGCAGTGGAGTGTGGCTATTGGCATCTGTACCGTTTCAATCCGCTATTAGCTAAAGAAGGTAAGAATCCGTTC GTACTTGATTCCAAAGCACCTGACTTGTCTAAGTTCCACGACTATCTTACGACTGAGGTTCGTTACAGCTCTTTGGCCAA AAAGTACCCGCCGGAACATGTCGAAGCGGTTTTTGCCTTGGCCGAACAGAATGCGGCCGAACGCTACAAATCTTATGTGC GTAAGTCCCAGGAATCTTATGCGGAATAA Protein sequence : MTKKLKYMTCDGNTAAAYASYAFTEVAGIYPITPSSPMADYVDQWAQAGRKNIFGQTVNVIEMQSEGGASGVVHGSLAAG ALTTTYTASQGLLLMIPNMYKIAGELLPCVFHISARTLATHALSIFGDHSDVMAARQTGFAMLFGSSVQEVVWMACVAHL SAIKSRVPFMDIFDGFRTSHEIQKIQVPEYDDLAELVDYEAVKEFRERALSPNHPTLRGSAMNPDIFFQVREASNRFYNE LPDIVEHYMNEINKLAGTNYKLYDYYGDPEAERVVVCMGSAVEALKETVDFLTAKGEKVGVLNVHLFRPFDTKRFVDALP KTTKKIAVLDRTKEPGAQGEPLFQDVVTAYYGHENPPIIVGGRYGLGSKNTTPGDFLAVFKHLNEDKPRHNFTIGIIDDV SNLSLAPIKGINTVPAGTVSCRFWGLGSDGTVGANKNSIKIIGDHTDMYAQAYFSYDSKKSGGITISDLRFGKSPIHSTY LIDMADFASCSQQSYVDKYDMLSSLKDNGVFLLNTLWTDEELNTFLPASMKRAIATKKIRFYTIDAVEIAKGLGLGGRTN TVMQAAFFKLSNIIPIEEAVEYMKKAIVKSYSKKGDEIVKMNYGAVDAGCEKIHEVKYPADWANAVDGPAKLRNVPEFVS KIADVTNAQNGDSLPVSTFLGMEDGTLPQGTSKYEKRGIAVDVPHWIPENCIQCNQCSYVCPHGVIRPFLVTEEEAAKAP ATMTTIKGTKPYDGYKFIIQPSVLDCTGCGSCAQVCPAKNKALVMQPIGENMQQSEHWTYLTEKVTKKPNPMKSNIVKGT QFNMPYFEFSGACAGCGETPYAKLVTQLFGDKMMISNATGCSSIWGGSAPSQPYTTDEHGRGPSWANSLFEDNAEHGLGM LLGAKQLRNRLKEKLMELNRTVTDEAVKVAGANWLDNMAKTEGTIESAQSLVEALSNYHTDNPDEQKLIADIMENKDYLS KRSTWIFGGDGWAYDIGYGGLDHVLSTGEDINVLVFDTEVYSNTGGQASKSTPMGAIAQFAAGGKSVKKKDLGMMAMSYG YVYVAQIAMGANQAQTLKAIAEAEAYHGPSLIIAYSPCINHGIKGGMTRSQAREKQAVECGYWHLYRFNPLLAKEGKNPF VLDSKAPDLSKFHDYLTTEVRYSSLAKKYPPEHVEAVFALAEQNAAERYKSYVRKSQESYAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 56 |
