Gene Information

Name : Thal_0868 (Thal_0868)
Accession : YP_003473628.1
Strain : Thermocrinis albus DSM 14484
Genome accession: NC_013894
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 821124 - 822437 bp
Length : 1314 bp
Strand : +
Note : KEGG: sat:SYN_02713 response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase AAA; SMART: response regulator receiver; ATPase AAA

DNA sequence : 
ATGAAGGCCAAGGTTCTCGTTGTAGATGACGAAAGAAGCATAAGGGATACCCTGGAACGCCTACTTAAGAGTGAAGGGTA
CGCTGTAAAGACGGTAAGTACCATGGGGGAGGCCCTTCAGAGAGCAAAGGAGGAGTACTTTCACTGTGTGCTTCTTGATC
TGTGGCTTCCCGATGCCAACGGCCTCAATCACATAAAGGAACTTTTGGAGATACTGCCAGGTACCAGGATAGTGGTTATA
ACGGGTCATGGAAACGTGCAGGACGCGGTGAGAGCCATAAAGGATGGTGCCTTCGACTTTATAGAAAAACCCTTCTCCCT
GGAGAGACTTTTGCTGACCCTCAAGAAAGCGGTGGAGAGCTTTCCGGAGGCAATCCAAGAGAAAGAACTTCCTATAGTGG
GTAACAGCAAGGCCATAAGGGAGATAAAGGAACTTATCCGAAAGGTAGCCCCCACCGACGTGCCTGTCCTTATAACAGGC
GAGTCCGGTACCGGAAAGGAACTGGTGGCCAGAAGTATACACTATCTGTCTCAACGTCAGAGAGGACCCTTCGTGGATAT
CAACTGCGCCTCTATACCCGACGACCTTCTGGAGGCGGAGTTGTTCGGCTACGAGAAAGGTGCTTTCACATCGGCATCTT
CCAGGAAATTGGGAAAACTGGAACTGGCCCATTCAGGCACCTTGTTCCTCGATGAGATAGGAGACATGAGCCTTAGGGCC
CAAGCAAAGCTTCTCAGGGTCTTAGAGACCAAAAGGTTCACACGACTGGGTAGCAACCAGGTGATAGAGTCGGATTTTAG
GATCATAAGTGCCTCCAACAAAGATCTTCTGCAGGAGGTGGAAAAGGGAAGCTTCCGGCAGGATCTTTACTACAGAATTT
CCACAGTGGTGATACATTTACCTCCTCTGAGAGAGAGGGTGGAGGACGTACCCCTTCTGGCAGAGTATTTTCTAAAACAG
TTCGCACCCGATAAGATTCTTTCGGAGGATGCCAAAGAAGAGCTCATGAGATATTCATGGAAGGGTAACGTGAGGGAACT
TAAGAACCTCATGGAGAGAATAGCCATACTACATACAGGCGAAAGGATCACCGCCAGAGACCTAAAAGCTCTCCTCTATG
TGCAGGATGAGGATTACAGGGGTCTGTTACAGGAACAGAACTTTAAAAAGGCAAAGATGATGTTTGAAAAACTCTTCCTT
ACCAAAAAGCTGAGGGAGAATCAGTACGACATAAAGAAGGTGGCCCAGATAACAGGTCTTGATCTTTCTACCCTCTATAG
GAAGATAAAACAGTATGGTATAGAGTTAAAATAG

Protein sequence : 
MKAKVLVVDDERSIRDTLERLLKSEGYAVKTVSTMGEALQRAKEEYFHCVLLDLWLPDANGLNHIKELLEILPGTRIVVI
TGHGNVQDAVRAIKDGAFDFIEKPFSLERLLLTLKKAVESFPEAIQEKELPIVGNSKAIREIKELIRKVAPTDVPVLITG
ESGTGKELVARSIHYLSQRQRGPFVDINCASIPDDLLEAELFGYEKGAFTSASSRKLGKLELAHSGTLFLDEIGDMSLRA
QAKLLRVLETKRFTRLGSNQVIESDFRIISASNKDLLQEVEKGSFRQDLYYRISTVVIHLPPLRERVEDVPLLAEYFLKQ
FAPDKILSEDAKEELMRYSWKGNVRELKNLMERIAILHTGERITARDLKALLYVQDEDYRGLLQEQNFKKAKMMFEKLFL
TKKLRENQYDIKKVAQITGLDLSTLYRKIKQYGIELK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-60 44
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-60 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thal_0868 YP_003473628.1 Fis family transcriptional regulator BAC0467 Protein 3e-71 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thal_0868 YP_003473628.1 Fis family transcriptional regulator VFG1214 Protein 2e-64 42
Thal_0868 YP_003473628.1 Fis family transcriptional regulator VFG1249 Protein 3e-58 41