Gene Information

Name : Thal_0780 (Thal_0780)
Accession : YP_003473540.1
Strain : Thermocrinis albus DSM 14484
Genome accession: NC_013894
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 738212 - 739738 bp
Length : 1527 bp
Strand : -
Note : KEGG: dma:DMR_19750 sodium/solute symporter family protein; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter

DNA sequence :
ATGGGTGGTATCAACACAGTAGCAGTTTTATTCTTCTTCTTGTTTGTGGCCATAACCCTCATCATCACCTACTGGGCCGC
CAAGAGAACCAGGACAGCCAGTGAGTTTTACGCTGCAGGCAGAAGCATATCGGGTTTTCAGAATGGACTTGCTTTGGCAG
GTGATTATATGAGTGCAGCCTCCTTCTTAGGTATAGCGGGTATGGTGGCCACAAAAGGTTTTGACGGTCTCATATACTCC
ATAGGTTTCTTAGTAGGCTGGCCCATAGTGATGTTCCTCATAGCGGAACCTCTAAGAAACTTGGGTAAGTACACCTTTGC
AGACGTGGTAGCTTATAGACTCAGGTACACTCCTATAAAGACGGTATCAGCTTTAGGATCTTTAACGGTGGTCATTCTGT
ATCTCATAGCTCAGATGGTGGGTTCAGGAAACCTCATAAAGCTTCTCTTTGGTTTCCCCTACGAGCTTTCTGTCATCATC
GTAGGGACCCTCATGGTGGTCTACGTCCTGTTTGGAGGTATGATAGCCACCACATGGGTCCAGATAATAAAAGCGGTTCT
TCTCTTGGGAGGAGCTACTGTGTTGGCTCTCCTCACCTTGGCCCAGTTCGGGTTCAGTCCGGAAAGCATGTTCTCCGCTG
TCAAAACCCAGTATGGAGAGAAGTTCCTCCAGCCAGGAGGTCTTGTGAAGGATCCTCTCGATGCCATCTCTCTCGGAACA
GCCCTCATGTTTGGGACCGCCGGCCTTCCCCACATCCTCATGAGGTTCTATACTGTACCGGACGCACCTGAGGCCCGTAA
ATCCGTCTTTTACGCTACAGGATTCATAGGATACTTCTACATACTCACTTTCGTGATAGGGTTTGGTGCCCTCCTTCTAG
TGGGTAAGGACCGTATACTGGCTGTGGACAAAGGTGGTAACATGGCTGCGCCACTGCTGGCTGAGGTTCTGGGAGGAAAC
CCCTTCTTAGGTTTCATAGCAGCGGTTGCCTTTGCCACCATACTGGCTGTGGTGGCTGGCCTCACACTGGCAGGTGCCTC
TGCCCTCTCTCACGATCTGTATGTGGGTGTTCTAAAAAGAGGTAAGGCTACGGAAGATGAAGAGATAAAGGTGACTAAGA
TAGCTGTCCTCTTACTGGGTGTCGTGTCCATCCTCTTAGGTATAGCCTTCAAAGGACAGAACGTAGCCTTTTTGGTAGGA
CTGGCTTTTGCTATAGCGGCCAGTGCCAACTTCCCGGCCTTAGTCCTCTCCATCTACTGGAAGAGGTTCACCACAGCGGG
AGCTGTTGCCAGTATACTCACAGGATTAACCCTATCGGTGGTTCTCATAGTACTCAGTAAAGCTGTCTGGGTGGATATTC
TCAAAAACCCTGCGCCTGTATTCCCGTGGGGTAACCCTGCCCTCATCTCCATGCCTGCAGCCTTCTTGGTGGGTGTGTTG
GTCTCTTTGCTCACCTCTGAGAAAGAAGCAGAAGAGAAGTACGAGGAGATGAAGGTACGTAAGCTATTGGGCTTAGGTGC
CGAGTGA

Protein sequence :
MGGINTVAVLFFFLFVAITLIITYWAAKRTRTASEFYAAGRSISGFQNGLALAGDYMSAASFLGIAGMVATKGFDGLIYS
IGFLVGWPIVMFLIAEPLRNLGKYTFADVVAYRLRYTPIKTVSALGSLTVVILYLIAQMVGSGNLIKLLFGFPYELSVII
VGTLMVVYVLFGGMIATTWVQIIKAVLLLGGATVLALLTLAQFGFSPESMFSAVKTQYGEKFLQPGGLVKDPLDAISLGT
ALMFGTAGLPHILMRFYTVPDAPEARKSVFYATGFIGYFYILTFVIGFGALLLVGKDRILAVDKGGNMAAPLLAEVLGGN
PFLGFIAAVAFATILAVVAGLTLAGASALSHDLYVGVLKRGKATEDEEIKVTKIAVLLLGVVSILLGIAFKGQNVAFLVG
LAFAIAASANFPALVLSIYWKRFTTAGAVASILTGLTLSVVLIVLSKAVWVDILKNPAPVFPWGNPALISMPAAFLVGVL
VSLLTSEKEAEEKYEEMKVRKLLGLGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 7e-94 55
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 1e-69 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thal_0780 YP_003473540.1 SSS sodium solute transporter superfamily protein BAC0564 Protein 2e-110 64
Thal_0780 YP_003473540.1 SSS sodium solute transporter superfamily protein BAC0570 Protein 2e-105 62