|
Name : Thal_0239 (Thal_0239) Accession : YP_003473001.1 Strain : Thermocrinis albus DSM 14484 Genome accession: NC_013894 Putative virulence/resistance : Virulence Product : ATPase, FliI/YscN family Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.14 Position : 232104 - 233381 bp Length : 1278 bp Strand : + Note : SMART: ATPase AAA; TIGRFAM: ATPase, FliI/YscN family; KEGG: nis:NIS_0626 flagellar-specific ATP synthase FliI; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein DNA sequence : GTGAGAAAGGTATTTAGGGTATACTCTCGTGTAACTAAGGTGAGCGGTGTTTACGTAGAGGCCTTCAACGTAGAGGGAGC TGTAGGAGACAGGGTCATTATAAAGACCGTGGATGGTGAACGAGAAGGAGAAATCATAGGGTTACACGAAGACAGGTGTA TCATCATGCCCTTCGGTAGTATGATGGGTGTGAAGGTAGGAGACAAAGTGTTGATTACGGGGGAGAAAGTTCACACCTTT ACCGGAGACAGAGTGATAGGGGCGGTGTTGGATCCCTTTGGGCGGAGCTTGACAGACGGAAGGGTGGTGGGTGAGGAGAA AATACGGGTGGACTTTGTTGACGTAAATCCATTGGAGAGAGAGAGGATAAGGGAAGTTCTGGATTGTGGCGTGAGGTCTG TAAACGCTCTCCTCACTTTGGGGAAAGGACAGAAGGTGGGAGTGTTCGCGGGTGCAGGTGTAGGCAAAAGCACCCTTTTG GGGATGATAACACGGTGGGCGCAGGTAGATGTGGTGGTACTCGCTCTTATAGGGGAGAGAGGCAGGGAGGTAAGGGAGTT TCTGGAAGATGTTTTGGGGGAAGAAGGGCGTCGTAGAAGTGTAGTGGTGGTGACCACTTCCGATCAGACACCTATTATGA AGGTTAAGGGAGCCATAAGTGCGGTAGCACACGCAAGGTACTTTGCTGGAAGAGGTAAGGACGTACTCCTCATCATGGAC TCTTTGACGAGGTTTGCTATGGCTCAGAGAGAGATAGGCCTTGCGGCGGGAGAACCCCCAACTCTGAAAGGTTACACTCC TTCTGTGTTTCACATGTGTGCTAGATTAGTGGAGAGTTGCGGGAAGTTTGTAAGGGGAGGAAGCATAACGGGGATATTCA GTGTACTGGTGGAGGGAGATGATCTTCATACAGATCCTGTGGCAGACGCTCTTCTCGGGATGTTGGACGGACACATAGTC CTCTCCAGAAAGAGAGCCAGTTCAGGTCTTTACCCCGCTGTGGACCCGGTGAGGAGTTTAAGTAGAGTCATGCCTCATTT GGTGACGGAGGATCACATGCGCATGGCCCTCCACATAAGGGATGTTCTCTCTGTGTACGACGCCATGGAGGAGGTAGTCC ATGTGGGTCTGTACCGACAGGGTTCCAATCCCTTTGTGGATAAAGTGATAAAACACAGAGATGAGATAAGATCTTTCTTC CATCAACCTGCAGAGGTAAAAGTGAGTTTTCAAGAAAGCGTGGAGGCTCTTAGGGAGCTTTACCGACTTTTGAGTTAA Protein sequence : MRKVFRVYSRVTKVSGVYVEAFNVEGAVGDRVIIKTVDGEREGEIIGLHEDRCIIMPFGSMMGVKVGDKVLITGEKVHTF TGDRVIGAVLDPFGRSLTDGRVVGEEKIRVDFVDVNPLERERIREVLDCGVRSVNALLTLGKGQKVGVFAGAGVGKSTLL GMITRWAQVDVVVLALIGERGREVREFLEDVLGEEGRRRSVVVVTTSDQTPIMKVKGAISAVAHARYFAGRGKDVLLIMD SLTRFAMAQREIGLAAGEPPTLKGYTPSVFHMCARLVESCGKFVRGGSITGIFSVLVEGDDLHTDPVADALLGMLDGHIV LSRKRASSGLYPAVDPVRSLSRVMPHLVTEDHMRMALHIRDVLSVYDAMEEVVHVGLYRQGSNPFVDKVIKHRDEIRSFF HQPAEVKVSFQESVEALRELYRLLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 5e-61 | 44 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 7e-60 | 44 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-60 | 44 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 8e-61 | 44 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 5e-60 | 44 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-60 | 44 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 6e-61 | 44 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 6e-61 | 44 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 1e-54 | 44 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-59 | 43 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-59 | 43 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 6e-57 | 42 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 2e-48 | 41 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 3e-52 | 41 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 5e-53 | 41 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 3e-52 | 41 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-46 | 41 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-51 | 41 |
| escN | AAC38383.1 | EscN | Virulence | LEE | Protein | 3e-50 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thal_0239 | YP_003473001.1 | ATPase, FliI/YscN family | VFG1254 | Protein | 6e-64 | 45 |
| Thal_0239 | YP_003473001.1 | ATPase, FliI/YscN family | VFG0192 | Protein | 5e-61 | 44 |
| Thal_0239 | YP_003473001.1 | ATPase, FliI/YscN family | VFG0048 | Protein | 7e-59 | 44 |
| Thal_0239 | YP_003473001.1 | ATPase, FliI/YscN family | VFG2331 | Protein | 5e-61 | 43 |
| Thal_0239 | YP_003473001.1 | ATPase, FliI/YscN family | VFG0390 | Protein | 5e-60 | 43 |
| Thal_0239 | YP_003473001.1 | ATPase, FliI/YscN family | VFG2144 | Protein | 6e-61 | 42 |
| Thal_0239 | YP_003473001.1 | ATPase, FliI/YscN family | VFG2499 | Protein | 1e-60 | 42 |
| Thal_0239 | YP_003473001.1 | ATPase, FliI/YscN family | VFG0730 | Protein | 2e-50 | 41 |
