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Name : SLGD_00952 (SLGD_00952) Accession : YP_003471217.1 Strain : Staphylococcus lugdunensis HKU09-01 Genome accession: NC_013893 Putative virulence/resistance : Unknown Product : S1 RNA-binding domain-containing transcription accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1008729 - 1010879 bp Length : 2151 bp Strand : + Note : - DNA sequence : ATGGACAATCAATTAATTGCAACTATCGAACAAAATTATTCATTTTCAAAAAAACAAATTACTGCAGTATTATCATTATT AGAAGATAATAATACAGTCCCTTTTATTGCTAGATATCGAAAAGAGGCTACTGGCGGTTTAGATGAAGTTGAAATAAAAC AAATAGCTGATGAATATCAATATGTAGCACATTTACAAAAGCGTAAAGAAGAAGTGATTAATAATATAGAACAACAGGGA TTGCTTACAGAAGAATTAAAACAAGACATCTTAAAACAGACTAAATTACAGCGTGTTGAAGATTTATATCGGCCTTACAA ACAAAAGAAAAAAACACGAGCAACCGAGGCAAAACGTAAAGGATTAGAACCGTTTGTAGACTGGTTACTGTTACCTAAAC TAGACGTAGATATAACAACAAAAGCAGCCTCATTCTTAAATGAAGAGGTAAACGCTGTTGAAGAAGCTATCCAAGGTGCG CAAGATATTATTGCTGAACGTATTGCAGATCAACCTTCATATCGTACAAAACTGTTAAAAGATGTGTACCATCAAGGGCA ATTGGTTACGACAAAAAAGAAAAAAGCGGAAGATGAAAAAGAAATTTTTTCAATGTATTATGATTATTCCGAACCTATTA AAAAAATAGCTAACCACAGAGTTTTAGCGGTGAATCGTGGAGAAAAAGAAAAAATATTGACTGTGAAAATTGAATTTGAT ATCACGCATATTCAACAGTTTATTGCTAAAAGAGAAATAAAATATCAAACTGAAGCAAGTCGTATTATTCAAGAGGCAAT AAGCGATAGTTTGAAACGTTTAGTAATGCCATCAATTGAACGAGAGATAAGATCAGATCTTACTAATAAAGCAGAACATC ATGCAATTGATGTTTTTAGTGAGAATTTACGTCATTTATTACTACAACCACCAATGCGTGGTAAACAAATTTTAGGGATT GATCCCGCATTTAGAACAGGATGTAAATTGGCAGTAATTAATCCATTTGGCACTTTTGTTGCTAAGAATGTGATGTATCC ACATCCTCCTGTATCTAAAGTCCAAGAGGCAAAAAACATATTATTAAAAATGATTAGAGATTATAATGTAGAATTGATTG CAATAGGAAATGGTACTGCTAGTCGTGAGACAGAACAATTTGTAGCACAAGTTATTCAAGAATACCAATTATCAGTTCAA TTTATTATCGTCAATGAAGCAGGTGCATCTGTATATTCTGCTTCTGAAGTAGCTCGTAATGAGTTTCCTAACTTTCAAGT AGAAGAAAGAAGTGCAGTTTCAATAGGTCGTCGAGTTCAAGATCCGTTGAGTGAATTGGTTAAAATAGATCCAAAATCAA TTGGTGTTGGGCAGTATCAACATGATGTTAATCAAAAAGAACTTGAGCAGGCACTTGCATTTGTTGTTGAAACAGCTGTG AACCAAGTTGGTGTTGACGTTAATACAGCATCAAAATCATTATTGCAATATGTATCCGGCTTAACGGCACCAATCGCACA AAATATTATAGATTACCGTGAACAACATGGTGCTATTAAGCATAATAAAGAAATCAGTAAAGTAAAAAGATTAGGTGCTA AAACATTTGAACAAAGCATTGGATTTTTACGTATCATCGATGGAACAGAGCCACTGGATAATACGTCTATCCACCCAGAA AGTTACCAAGCGACATATCAATTACTTCAGCAACTGAATTTAGATATCAATGAGTTAGGAACGAAAGGACTAAAAGAAAA ATTAAGTAAATTAGATGTGAATTCACTTTCTACAAAATTAAATATAGGTATTCCAACATTAGAAGACATTATTGAATCTT TAAAAGCACCACACAGAGATCCACGAGACGAGTTCGAAACACCACTGTTAAAATCAGATGTACTTTCAATAGCAGACTTA TCAAAAGGAATGAAATTAAGTGGAACTGTGAGAAATGTCGTTGATTTTGGTGCGTTTGTTGATATTGGTGTTAAACAAGA TGGACTGGTTCATATATCTAAACTATCTAATAAATATGTCAAAAACCCAATGGATATTGTAACTGTAGGAGATATTGTTG ATGTATGGATAATAGATATAGATGAGCAAAAAGGAAAAGTATCATTAACAATGGTTAATCCAAATGAATAA Protein sequence : MDNQLIATIEQNYSFSKKQITAVLSLLEDNNTVPFIARYRKEATGGLDEVEIKQIADEYQYVAHLQKRKEEVINNIEQQG LLTEELKQDILKQTKLQRVEDLYRPYKQKKKTRATEAKRKGLEPFVDWLLLPKLDVDITTKAASFLNEEVNAVEEAIQGA QDIIAERIADQPSYRTKLLKDVYHQGQLVTTKKKKAEDEKEIFSMYYDYSEPIKKIANHRVLAVNRGEKEKILTVKIEFD ITHIQQFIAKREIKYQTEASRIIQEAISDSLKRLVMPSIEREIRSDLTNKAEHHAIDVFSENLRHLLLQPPMRGKQILGI DPAFRTGCKLAVINPFGTFVAKNVMYPHPPVSKVQEAKNILLKMIRDYNVELIAIGNGTASRETEQFVAQVIQEYQLSVQ FIIVNEAGASVYSASEVARNEFPNFQVEERSAVSIGRRVQDPLSELVKIDPKSIGVGQYQHDVNQKELEQALAFVVETAV NQVGVDVNTASKSLLQYVSGLTAPIAQNIIDYREQHGAIKHNKEISKVKRLGAKTFEQSIGFLRIIDGTEPLDNTSIHPE SYQATYQLLQQLNLDINELGTKGLKEKLSKLDVNSLSTKLNIGIPTLEDIIESLKAPHRDPRDEFETPLLKSDVLSIADL SKGMKLSGTVRNVVDFGAFVDIGVKQDGLVHISKLSNKYVKNPMDIVTVGDIVDVWIIDIDEQKGKVSLTMVNPNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 5e-127 | 42 |
