Gene Information

Name : SLGD_00887 (SLGD_00887)
Accession : YP_003471152.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Resistance
Product : beta-lactamase regulatory sensor-transducer BlaR1
Function : -
COG functional category : K : Transcription
COG ID : COG4219
EC number : -
Position : 948846 - 950603 bp
Length : 1758 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTAAGTTATTAATAATGAGCATAGTAAGCTTTTGTTTTATATTTCTATTGTTATTATTTTTTAGGTACATATTAAA
ACGCTATTTTAATTATATGTTAAATTATAAAGTTTGGTATCTAACTCTTCTTGCAGGATTAATTCCTTTCATTCCTATTA
AATTCTCTCTTTTTAAATTTAATAATGTGAATAATCAAGCGCCCACAGTTGAAAGTAAGTCACACGACTTGAACCATAAC
ATAAATACCACCAAACCTATTCAAGAGTTCACAACAGATATCCATAAGTTTAATTGGGATTCAATTGATAATATCTGCAC
AGTTATTTGGATAGTTTTAGTTATTATTTTAAGTTTTAAATTTTTGAAAGCCTTATTATATCTTAAATATTTAAAGAAAC
AGTCACTTTATCTAAACGAAAATGAAAAAAATAAAATAGATACGATACTTTTCAACCATCAATATAAAAAAAATATTGTG
ATTCGAAAAGCAGAGACTATTCAATCTCCAATAACTTTTTGGTATGGGAAATATATTATTTTGATTCCTAGTTCATATTT
TAAAAGTGTAATTGACAAAAGACTAAAATATATAATATTGCATGAATATGCTCATGCTAAAAATAGAGATACTTTACATT
TAATTATCTTTAATATCTTCTCTATTATTATGAGTTACAATCCATTAGTACATATTGTAAAAAGAAAGATAATTCATGAC
AATGAAGTAGAAGCCGATAGATTTGTCCTTAATAATATTAACAAAAATGAATTTAAAACTTATGCGGAATCTATTATGGA
CTCCGTATTAAATGTTCCATTTTTTAATAAAAATATATTAAGCCATTCATTTAATGGTAAAAAGTCATTACTCAAAAGAA
GATTAATTAATATAAAAGAAGCCAATCTGAAAAAACAGTCCAAATTAATTCTAATTTTTATTTGTATTTTTACTTTTTTG
CTCATGGTAATTCAAAGCCAGTTTTTGATGGGGCAATCCATAACTGATTATAATTATAAAAAGCCCTTACACAACGATTA
CCAAATTTTAGATAAAAGTAAAATTTTTGGTTCAAATAGTGGATCTTTCGTCATGTACAGCATGAAGAAAGACAAATACT
ATATTTATAACGAAAAAGAAAGTAGAAAAAGGTATTCTCCTAATTCAACTTATAAAATTTATTTAGCTATGTTTGGACTT
GACCGACATATTATAAATGATGAAAATTCACGTATGTCATGGAATCATAAGCATTACCCTTTTGATGCTTGGAATAAGGA
ACAAGATTTAAATACAGCAATGCAAAATTCAGTTAATTGGTACTTCGAACGTATTAGCGATCAAATACCAAAGAACTATA
CTGCGACTCAACTCAAGCAATTAAATTATGGTAATAAAAATTTGGGAAGTTATAAAAGCTATTGGATGGAAGATAGTTTG
AAAATATCTAATCTTGAACAAGTAATAGTTTTTAAAAATATGATGGAACAAAATAACCATTTTAGTAAAAAAGCAAAGAA
TCAATTATCTTCTTCATTATTGATTAAGAAAAATGAAAAGTATGAACTGTATGGGAAAACAGGTACAGGTATAGTAAACG
GGAAGTATAATAATGGGTGGTTTGTAGGTTACGTAATTACAAATCATGATAAGTATTATTTTGCTACACATTTATCAGAT
GGAAAGCCATCTGGGAAAAATGCTGAATTAATCAGTGAAAAAATATTAAAAGAAATGGGTGTTTTAAATGGCCAATAA

Protein sequence : 
MAKLLIMSIVSFCFIFLLLLFFRYILKRYFNYMLNYKVWYLTLLAGLIPFIPIKFSLFKFNNVNNQAPTVESKSHDLNHN
INTTKPIQEFTTDIHKFNWDSIDNICTVIWIVLVIILSFKFLKALLYLKYLKKQSLYLNENEKNKIDTILFNHQYKKNIV
IRKAETIQSPITFWYGKYIILIPSSYFKSVIDKRLKYIILHEYAHAKNRDTLHLIIFNIFSIIMSYNPLVHIVKRKIIHD
NEVEADRFVLNNINKNEFKTYAESIMDSVLNVPFFNKNILSHSFNGKKSLLKRRLINIKEANLKKQSKLILIFICIFTFL
LMVIQSQFLMGQSITDYNYKKPLHNDYQILDKSKIFGSNSGSFVMYSMKKDKYYIYNEKESRKRYSPNSTYKIYLAMFGL
DRHIINDENSRMSWNHKHYPFDAWNKEQDLNTAMQNSVNWYFERISDQIPKNYTATQLKQLNYGNKNLGSYKSYWMEDSL
KISNLEQVIVFKNMMEQNNHFSKKAKNQLSSSLLIKKNEKYELYGKTGTGIVNGKYNNGWFVGYVITNHDKYYFATHLSD
GKPSGKNAELISEKILKEMGVLNGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaR1 YP_253678.1 bla regulator protein blaR1 Not tested ¥ÕSh1 Protein 0.0 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_00887 YP_003471152.1 beta-lactamase regulatory sensor-transducer BlaR1 NC_005054.2598288.p0 Protein 0.0 100
SLGD_00887 YP_003471152.1 beta-lactamase regulatory sensor-transducer BlaR1 NC_002952.2858974.p0 Protein 0.0 99
SLGD_00887 YP_003471152.1 beta-lactamase regulatory sensor-transducer BlaR1 NC_005127.2610353.p0 Protein 0.0 96
SLGD_00887 YP_003471152.1 beta-lactamase regulatory sensor-transducer BlaR1 NC_003140.1122764.p0 Protein 0.0 95
SLGD_00887 YP_003471152.1 beta-lactamase regulatory sensor-transducer BlaR1 NC_005011.2598315.p0 Protein 0.0 95
SLGD_00887 YP_003471152.1 beta-lactamase regulatory sensor-transducer BlaR1 NC_007931.3978624.p0 Protein 0.0 95
SLGD_00887 YP_003471152.1 beta-lactamase regulatory sensor-transducer BlaR1 NC_010419.6155810.p0 Protein 0.0 95
SLGD_00887 YP_003471152.1 beta-lactamase regulatory sensor-transducer BlaR1 NC_005951.2853425.p0 Protein 0.0 95
SLGD_00887 YP_003471152.1 beta-lactamase regulatory sensor-transducer BlaR1 NC_009477.5169314.p0 Protein 0.0 94
SLGD_00887 YP_003471152.1 beta-lactamase regulatory sensor-transducer BlaR1 AE015929.1.gene1652. Protein 0.0 89