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Name : SLGD_00088 (SLGD_00088) Accession : YP_003470363.1 Strain : Staphylococcus lugdunensis HKU09-01 Genome accession: NC_013893 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 91740 - 93761 bp Length : 2022 bp Strand : + Note : TC 3.A.3.7.1 DNA sequence : ATGATTGAAACTAAAAAAATATTTGAATCCAGTTTGGTCAAACAGGCTTTAAAAGAAAGCATTATTAAATTAAACCCAGT ATGCATGGTTAAAAATCCTATTATGTTTGTGGTAGAAGTAGGGATGATGCTCTCTTTAATTTTAACAATGGCACCAAATT TATTTAGTTATGAAAATGTATCACGAACGTATTTATTTAGTATTTTCTTTATATTATTATTAACGTTAATTTTCGCAAAT TTTTCAGAGGCTTTAGCAGAAGGACGTGGTAAAGCACAGGCAAAAGCATTGCGCCAAACACAAACTGAAATGACTGCAAG ACGTATTAAGTCTGACGGTAGTTATGAAATCATTGATGCTAGCCAATTGAAAAAAGGAGATATTGTACGTGTAGAAACGG GCGAGCAAATTCCGAATGACGGTCAAGTTATTAATGGATTAGCTACCGTAGATGAATCTGCAATTACAGGTGAGTCTGCA CCAGTTATTAAAGAAAGTGGAGGAGACTTCAATAATGTTATTGGAGGTACTTCTGTAGCTTCCGACTGGTTGGAGGTTGA AATCACATCAAATCCAGGTCAATCATTTTTAGATAAAATGATTTATTTGGTTGAAAATGCGACAAGAAAGAAAACACCTA ACGAAATCGCATTATTTACATTATTGATGACCTTAACAATTGTTTTTTTAGCTGTCATTTTAACAATGTATCCTTTAGCG ACATTTTTACATTTCAATTTATCTATTGCAATGCTGATTGCTTTAACTGTTTGTCTGATTCCAACAACGATTGGTGGCTT ATTATCTGCCATTGGAATCGCGGGTATGGATCGCGTTACGCAATTTAATATTTTAGCTAAAAGTGGACGTTCAGTAGAAA CATGTGGGGATGTTAATGTTTTGATATTAGACAAAACTGGGACAATTACTTATGGGAATCGTATGGCTAGCGAATTTATT CCGGTGGCATCGACGCAGTTTGAAAGATTGGTGAAAGCTTCATACGAATGTTCTGTCGAAGATGATACACCAGAAGGTAG CAGTATTGTAAAGTTAGCACGTCAGCAACACATTGATTTACCAACAGACAGAGGAGAATATTTCCCATTTACTGCTGAAA CACGCATGAGTGGTGTGAAATTTTCTAATCGTGAAGTCTATAAAGGTGCACCTAATAGCATGATTAAACGTGTTAAAGAA GCAGGTGGCCATATTCCTGATGATTTAGACACGTATGTAAATGAAGTGTCTAAAAAAGGTGGCACACCATTAGTTGTCAT TGAAAATAACGTCATATTAGGTGTTATTTATTTAAAAGATGTTATTAAAGAAGGGTTAGTGGCACGTTTTCAAGAATTGC GTGCGATGGGCATCGAAACGGTGATGTGTACAGGAGACAATCAACTTACTGCTGCAACCATTGCGAAAGAAGCGGGTGTA GATCGCTTTGTTGCCGAGTGTAAACCTGAAGATAAAATTAATGTTATTAAAGAAGAACAAGCAAAAGGTCATATCGTCGC GATGACAGGTGATGGTACAAATGATGCACCTGCTTTAGCTGTAGCTAATGTGGGGCTAGCGATGAATTCAGGTACGATGA GTGCGAAAGAAGCTGCCAATTTGATTGATCTAGATTCAAATCCAACTAAATTAATGGAAGTTGTATTGATAGGCAGACAA TTACTCATGACGCGAGGTGCTTTAACAACGTTCAGTATTGCGAATGATGTGGCTAAATATTTTGCCATTTTACCTGCAAT GTTTATGTCTGCTATGCCTGCAATGAATCATTTGAATATGATGCATTTACATTCACCAGAATCAGCCGTACTTTCAGCTT TAATATTTAATGCCTTGATTATTGTGTTGCTTATTCCAATTGCAATGAAAGGCGTGAAATTTAAAGGTGTTTCAACTCAA ATGATATTAATAAAGAATATATTGATTTATGGAATAGGTGGCATGATTGTACCATTTATTGGTATTAAGCTGATTGATTT AATCATTCAATTTATTGTTTGA Protein sequence : MIETKKIFESSLVKQALKESIIKLNPVCMVKNPIMFVVEVGMMLSLILTMAPNLFSYENVSRTYLFSIFFILLLTLIFAN FSEALAEGRGKAQAKALRQTQTEMTARRIKSDGSYEIIDASQLKKGDIVRVETGEQIPNDGQVINGLATVDESAITGESA PVIKESGGDFNNVIGGTSVASDWLEVEITSNPGQSFLDKMIYLVENATRKKTPNEIALFTLLMTLTIVFLAVILTMYPLA TFLHFNLSIAMLIALTVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMASEFI PVASTQFERLVKASYECSVEDDTPEGSSIVKLARQQHIDLPTDRGEYFPFTAETRMSGVKFSNREVYKGAPNSMIKRVKE AGGHIPDDLDTYVNEVSKKGGTPLVVIENNVILGVIYLKDVIKEGLVARFQELRAMGIETVMCTGDNQLTAATIAKEAGV DRFVAECKPEDKINVIKEEQAKGHIVAMTGDGTNDAPALAVANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGRQ LLMTRGALTTFSIANDVAKYFAILPAMFMSAMPAMNHLNMMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGVSTQ MILIKNILIYGIGGMIVPFIGIKLIDLIIQFIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 0.0 | 88 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 0.0 | 87 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 87 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 87 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 87 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 87 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-140 | 54 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 4e-140 | 54 |
